Mus caroli (Ryukyu mouse): 110311656
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Entry
110311656 CDS
T05910
Symbol
Alcam
Name
(RefSeq) CD166 antigen isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110311656 (Alcam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110311656 (Alcam)
04090 CD molecules [BR:
mcal04090
]
110311656 (Alcam)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
Other
110311656 (Alcam)
CD molecules [BR:
mcal04090
]
Proteins
110311656 (Alcam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
Ig_2
I-set
ig
V-set
C1-set
Ig_PDGFR_d4
DUF6377
Podoplanin
FixQ
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
110311656
NCBI-ProteinID:
XP_021040767
Ensembl:
MGP_CAROLIEiJ_G0020805
UniProt:
A0A6P5R6Y7
LinkDB
All DBs
Position
16:complement(48929541..49130541)
Genome browser
AA seq
583 aa
AA seq
DB search
MASKVSPSCRLVFCLLISAAVLRPGLGWYTVNSAYGDTIVMPCRLDVPQNLMFGKWKYEK
PDGSPVFIAFRSSTKKSVQYDDVPEYKDRLSLSENYTLSIANAKISDEKRFVCMLVTEDN
VFEAPTLVKVFKQPSKPEIVNKAPFLETDQLKKLGDCISRDSYPDGNITWYRNGKVLQPV
EGEVAILFKKEIDPGTQLSTVTSSLEYKTTRSDIQMPFTCSVTYYGPSGQKTIYSEQEIF
DIYYPTEQVTIQVLPPKNAIKEGDNITLQCLGNGNPPPEEFMFYLPGQPEGIRSSNTYTL
TDVRRNATGDYKCSLIDKRNMAASTTITVHYLDLSLNPSGEVTKQIGDTLPVSCTISASR
NATVVWMKDNIRLRSSPSFSSLHYQDAGNYVCETALQEVEGLKKRESLTLIVEGKPQIKM
TKKTDPSGLSKTIICHVEGFPKPAIHWTITGSGSVINQTEESPYINGRYYSKIIISPEEN
VTLTCTAENQLERTVNSLNVSAISIPENDEADDISDENREKVNDQAKLIVGIVVGLLLAA
LVAGVVYWLYMKKSKTASKHVNKDLGNMEENKKLEENNHKTEA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaggtgtccccttcttgccgtctggttttctgcctcttgatctccgccgcg
gtcctcagaccaggccttggatggtacactgtcaactcagcatatggagacaccattgtc
atgccttgccgtctcgacgtacctcagaacctcatgtttggtaaatggaaatatgaaaag
cctgatggttccccagtatttattgcattccgatcttctacgaagaaaagtgtgcagtat
gatgatgtcccagagtacaaggacagactgagcctctcagaaaactacactttgtctatc
gccaatgctaagatcagtgatgagaagagatttgtgtgcatgctagtgaccgaggacaat
gtgtttgaagcacctaccctagtcaaggtgttcaagcaaccatctaaacctgaaattgta
aacaaagcaccctttcttgaaacagatcagctgaaaaagttaggtgactgcatttcaaga
gacagttacccagatggcaacatcacgtggtacaggaacggcaaagtgctgcaacctgtg
gaaggagaggtggccatactttttaaaaaggagattgatccaggaactcagctgtctacc
gtgacttcctccttggagtacaagacaaccaggtctgacatacaaatgccattcacctgt
tctgtgacatattatggaccctccggccagaaaacaatttattccgaacaagaaatcttt
gatatttactatcctacagagcaggtgacaatacaagtgctgccaccaaaaaatgccatc
aaagaaggggacaacatcacccttcagtgcttggggaatggcaacccacctcctgaggag
ttcatgttttacttaccaggacagcctgaaggcataagaagctcaaatacttacacactg
acagatgtgagacgcaatgccacaggggactacaaatgctcactcattgacaaaaggaac
atggcggcttcaacgaccatcacagttcactacttggatttatccttaaacccaagtggg
gaagtgaccaagcagattggcgataccctgcctgtgtcatgcacaatatctgcaagtagg
aacgcgactgtggtgtggatgaaggataacatccggctccggtccagcccttcattttcc
agtcttcattatcaggatgctgggaactatgtctgtgaaactgctcttcaggaggttgag
ggactgaagaaaagggagtcgctgacactcattgtagaagggaaacctcaaatcaaaatg
actaagaaaactgaccccagtggactgtctaaaactataatctgccatgtggaagggttt
ccaaagccagctatacattggaccattaccggcagtgggagcgtcataaaccaaacagag
gagtctccttatattaatggcaggtattatagtaaaattatcatttcccctgaggagaat
gttacattaacttgcacagcagaaaaccaactggagagaacagtaaactccctgaatgtc
tctgcgataagtattccagagaacgatgaggcagacgatataagtgatgaaaacagagaa
aaggtgaatgaccaggcaaaactgattgtgggaattgtcgttggtctcctcctcgctgcc
ctcgttgctggcgtcgtctactggctgtacatgaagaagtccaaaactgcatcaaaacat
gtaaacaaggaccttggtaatatggaggaaaataaaaagctggaggaaaacaatcacaaa
acagaagcctaa
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