Mus caroli (Ryukyu mouse): 110311838
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Entry
110311838 CDS
T05910
Symbol
Psmd2
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2
KO
K03028
26S proteasome regulatory subunit N1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03050
Proteasome
mcal05010
Alzheimer disease
mcal05012
Parkinson disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05017
Spinocerebellar ataxia
mcal05020
Prion disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110311838 (Psmd2)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110311838 (Psmd2)
09164 Neurodegenerative disease
05010 Alzheimer disease
110311838 (Psmd2)
05012 Parkinson disease
110311838 (Psmd2)
05014 Amyotrophic lateral sclerosis
110311838 (Psmd2)
05016 Huntington disease
110311838 (Psmd2)
05017 Spinocerebellar ataxia
110311838 (Psmd2)
05020 Prion disease
110311838 (Psmd2)
05022 Pathways of neurodegeneration - multiple diseases
110311838 (Psmd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mcal03051
]
110311838 (Psmd2)
Proteasome [BR:
mcal03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
110311838 (Psmd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN1_RPN2_N
RPN1_C
PC_rep
THAP
Motif
Other DBs
NCBI-GeneID:
110311838
NCBI-ProteinID:
XP_021041054
Ensembl:
MGP_CAROLIEiJ_G0020584
UniProt:
A0A6P5R7N8
LinkDB
All DBs
Position
16:17814669..17826939
Genome browser
AA seq
908 aa
AA seq
DB search
MEEGGRDKTPVQSQQPSATTPSGADEKSSGNERRDAGEKDKEQELSEEDKQLQDELEMLV
ERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKC
FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKAQ
REPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYV
PEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGR
HGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG
SGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLW
DVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLG
SIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ
TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY
AGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALI
AMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPE
VSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCP
YHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPL
PVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVIL
RKNPNYDL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggtggacgagacaagacaccggtgcagtcccaacagccctccgcgacaacc
cccagcggcgcggacgagaagtcgagtggcaatgagcgaagggatgccggggaaaaagac
aaagagcaggagctgtctgaggaggacaaacagcttcaagatgaactggagatgctcgtg
gagcgactcggggaaaaggatacatctctatatcgaccagctctggaggaactgagaaga
caaattcgttcttctacaacttccatgacttcagtacccaagcctctcaaatttctgcgt
ccacactatggcaaattgaaggaaatctatgagaacatggcccctggggagaataagtgt
tttgcagctgacatcatctctgttttggccatgaccatgagtggtgagcgagagtgcctc
aagtatcgactcgtgggctcccaggaagaattggcgtcttggggccatgaatacgtcaga
catctggcaggagaagtggctaaggagtggcaggagctggatgatgcagagaaagcacag
cgggaaccactgcttaccttggtaaaggaaatcgtcccctacaacatggctcacaatgca
gagcacgaggcttgtgacctgctcatggaaattgagcaggtcgatatgctagagaaggac
atcgatgagaatgcctacgccaaggtctgcctctatctcaccagttgtgtgaattatgta
ccagaacctgagaactctgccctcctgcgctgtgccttgggcgtgttccgaaagtttagc
cgtttccctgaagctctgagattggcactgatgctcaatgacatggaactggtagaagac
attttcacttcctgcaaagatgtggtggtccagaagcagatggcattcatgctgggtcgg
catggagtgttcctggagctgagtgaagatgtagaggaatatgaagacctcacagaaatc
atgtccaatgtccagctcaacagcaacttcttggccttagctcgggagctggacatcatg
gagcccaaggtgcctgatgacatctacaaaacccacctagagaataacaggtttggtggc
agtggctctcaagtggattctgcacgaatgaacctagcctcctcttttgtgaatggcttt
gtgaatgcagcctttggtcaagataaactactgactgatgatggcaacaaatggctttac
aagaacaaggaccatgggatgttaagtgctgctgcgtctctcggcatgattctgctgtgg
gatgtggatggtggcctcacccagattgacaagtatctgtactcctctgaggactacatc
aagtcaggagctctccttgcctgtggtatcgtgaattctggagtccggaatgagtgtgat
cctgccctggcactgctttcagactatgttctccataacagcaataccatgagacttggc
tccatctttgggctaggtttggcctatgctggctctaatcgggaagatgttctcacactg
ctgctacctgtaatgggagattccaagtccagcatggaggtagcaggtgtgacggctcta
gcttgtggaatgatagcagtggggtcttgcaatggagatgtcacttccaccatccttcag
accatcatggagaaatctgagactgagctcaaggatacctatgctcgttggcttcctctt
ggcctaggcctcaatcacttggggaaaggcgaagctattgaggccatcctggctgccttg
gaggtggtgtcagagccattccgcagttttgccaacaccctggtggatgtatgtgcctat
gcaggctctgggaatgtgctgaaggtccagcagcttctccacatctgtagtgagcacttt
gactctaaggaaaaggaagaagacaaagacaagaaggaaaagaaggacaaggacaagaag
gaagcccctgctgacatgggagcacatcagggagtagctgttctggggattgcacttatt
gctatgggggaagagattggtgcagagatggcattgcgaacttttggtcacttgctgaga
tatggggagcctaccctccgtcgggctgtacctttagcactggcactaatttctgtttca
aatccacgactcaacatcctggatacgctaagcaaattctctcatgatgctgatccagaa
gtttcctataactccatctttgctatgggcatggtgggcagtggtaccaataatgcccgt
ctggctgcaatgttgcgccagttagctcaatatcatgccaaggaccccaataacctcttc
atggtgcgcttggcacagggcctgacacatttagggaagggtacacttaccctctgcccc
tatcacagtgatcgacagctcatgagtcaagtggcggtggcaggactgctcacggtgctt
gtttctttcctggatgttcgaaacatcatcctaggcaagtctcactatgtcctgtatggc
ctggtggccgccatgcagcctcggatgctggttacatttgatgaggagctgcgaccattg
ccagtttctgtccgtgtgggtcaggcagtggatgtggtgggccaggctgggaagccaaaa
acaatcacagggttccagactcatacaacgccagtattgctggcccatggggagcgggca
gagttggccactgaggagtttcttcctgtcacccccattctggaaggctttgttattctt
cggaagaaccccaactatgatctttga
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