Mus caroli (Ryukyu mouse): 110311965
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Entry
110311965 CDS
T05910
Symbol
Ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X2
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110311965 (Ssrp1)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110311965 (Ssrp1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
110311965 (Ssrp1)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
110311965 (Ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
110311965
NCBI-ProteinID:
XP_021041212
Ensembl:
MGP_CAROLIEiJ_G0023739
UniProt:
A0A6P5RB62
LinkDB
All DBs
Position
2:79251110..79261228
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AA seq
708 aa
AA seq
DB search
MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELVEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKMAKDRKSRRKSSEVKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA
EDARREYEKAMKEYEGGRGDSSKRDKSKKKKKVKAKMEKKSTPSRGSSSKSSSRQLSDSF
KSKEFVSSDESSSGENKSKKKRRRSEDSEEELASTPPSSEDSASGSDE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacattggagttcaacgacatcttccaggaggtgaaagggtccatgaatgat
gggaggcttcgattgagccgtcagggtatcatctttaagaacagcaagacgggcaaagtg
gacaacatccaagctggggagctgacagaaggcatctggcgtcgggtagcattaggccat
gggcttaaactgctcacaaagaatgggcatgtctacaagtacgatggcttccgcgaatcg
gagtttgagaaactctctgacttcttcaaaactcactatcgccttgagctagtggagaag
gatctgtgtgtgaagggctggaactgggggacagtgaagtttggaggacagctgctttct
tttgacattggtgatcaaccagtctttgagatacccctaagcaatgtgtcccagtgtacc
acaggcaagaatgaggtgaccctggaattccaccagaatgacgatgctgaagtatctctc
atggaggtgcgcttctatgttcctcccacgcaggaagatggtgtggaccctgtggaggcc
tttgcccagaatgttctgtcaaaggcagatgtgatccaggccaccggagacgccatctgc
atcttccgggagctgcagtgtttgactcctcgcggtcgatacgatatccggatctaccct
acctttctacacctgcatggcaagacctttgactacaagatcccctatactacagttctc
cgtctcttcctgctaccacacaaggatcagagacagatgttctttgtgatcagcctggat
cctcccatcaagcagggccaaactcgttaccacttcctgatcctcctcttctccaaggac
gaggacatctccttgactcttaacatgaatgaggaagaagtagaaaagcgctttgagggg
cgactcaccaagaacatgtcaggatccctctatgaaatggtcagtcgggtcatgaaagca
cttgtcaaccgtaaaatcacagtcccgggcaacttccaagggcactcgggggcccagtgt
atcacctgctcctataaggccagctcaggactcctgtacccactggagcggggcttcatc
tatgtgcataagccccctgtgcacatccgcttcgatgagatctcttttgtcaactttgcc
cgtggcaccacgaccactcgttccttcgactttgagattgagaccaagcaaggcactcag
tataccttcagcagcattgaaagggaggagtatggaaagcttttcgattttgtcaatgcg
aaaaagctcaacatcaagaacagaggactgaaagagggcattaacccaggctatgacgac
tacgctgactctgatgaagaccagcatgatgcctatttggagaggatgaaggaggagggc
aagatccgggaggagaatgccaatgacagcagcgatgactcaggagaagagactgatgag
tccttcaatcctggtgaagaagaagaagatgtggcagaggagtttgacagcaacgcctct
gccagctcctccagcaatgagggtgacagtgaccgtgaagagaagaaacgggaacagctc
aaaagggccaagatggccaaggatcgaaagagccgcaggaagtcttcagaggtaaagaag
ggtaaagatccaaatgcgccaaagaggcctatgtctgcgtacatgttgtggcttaatgca
agccgcgagaagatcaagtcggatcatcctggcatcagtatcacagatctttccaagaag
gcaggggaaatctggaagggaatgtccaaagagaagaaagaggagtgggaccgcaaggct
gaggatgctaggagggagtatgagaaagccatgaaagagtatgaaggaggaagaggggac
tcgtctaaaagggacaagtctaagaagaaaaagaaagtaaaagcaaagatggaaaaaaag
tccactccttcccggggctcgtcatccaagtcttcatccaggcagttgagtgacagcttc
aagagcaaagagtttgtgtccagtgatgagagctcttcaggcgagaacaagagcaaaaag
aagaggaggcggagcgaggactctgaagaggaactagccagtactcctccaagctcagag
gactctgcctcgggatctgatgaataa
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