Mus caroli (Ryukyu mouse): 110312002
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Entry
110312002 CDS
T05910
Symbol
Gtf2e1
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03022
Basal transcription factors
mcal05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110312002 (Gtf2e1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110312002 (Gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110312002 (Gtf2e1)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
110312002 (Gtf2e1)
Prokaryotic type
Archaeal type
TFE
110312002 (Gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
110312002
NCBI-ProteinID:
XP_021041227
Ensembl:
MGP_CAROLIEiJ_G0020727
UniProt:
A0A6P5R824
LinkDB
All DBs
Position
16:complement(34571528..34602321)
Genome browser
AA seq
440 aa
AA seq
DB search
MADPDVLTEVPAALKRLAKYVIRGFYGIEHVLALDILIRNPCVKEEDMLELLKFDRKQLR
SVLNNLKGDKFIKCRMRVETAADGKTTRXNYYFINYRTLVNVVKYKLDHMRRRIETDERN
STNRASFKCPVCCSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKKDARTLLARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKDRAATAAGAAGLAGGHHREAWT
NKGPSYEDLYTQNVVINMDDQDDVHRPSLEGKAAKERPIWLRESTVQGAYSSEEMKEGGI
DVDTFQDREEARAGPDDNEEVMRALLIHEKKTSSATAGSVGAAAPVTAANGSDSESETSE
SDDDSPPRPAAAAPPPHHRDEDEEDEEFEEVADDPIVMVAGCPFSYSEVSQRPELVAQMT
PEEKEAYIAMGQRMFEDLFE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccagatgttctcactgaagttccagcggcattgaagcggctagccaagtat
gtcatccggggcttttatggcattgagcatgtgttggccttggacatcttgatacggaac
ccctgtgtaaaagaagaggacatgctggagctgctcaagtttgatcggaagcaacttcga
tccgttttgaataatttaaagggagacaagttcatcaaatgcagaatgagggtagagact
gctgcagatgggaagaccacccgcnataactactacttcatcaattaccgcactcttgtt
aacgtagtgaaatataagctggaccacatgagaaggaggattgaaacagatgagagaaat
tccaccaatcgggcttccttcaaatgtcctgtctgctgcagcactttcactgacctagaa
gccaatcaactgtttgatcccatgacaggaactttccgctgcaccttttgccatacagag
gtagaagaagatgaatcagcaatgcccaaaaaagatgctcgcacgcttttggcaagattt
aatgaacaaattgagcccatttatgcattgcttcgggagacagaggatgtaaacttggcc
tatgaaatacttgaaccagaacccacggaaatcccagcactgaagcaaagcaaggaccga
gcagcaactgctgctggagctgctggcctggcaggtgggcaccaccgagaggcgtggacc
aacaaaggcccctcgtatgaggacttgtatactcagaatgttgtcattaacatggatgat
caagatgatgtgcatcgcccctcgctggaagggaaagctgccaaagagagacctatttgg
ttgagagagagcactgtccaaggggcgtacagttctgaagagatgaaggaaggtggcatc
gatgtggacacatttcaggatcgagaggaagcccgtgcggggcctgatgacaatgaggaa
gtcatgcgagctctactcattcatgagaagaagacttcctcggcgacagctggctctgtg
ggagcagccgctccggtgacagctgctaatggcagtgactctgagagtgagaccagcgag
tcagatgacgactccccaccccggccagcagctgcggctcctcctcctcatcatcgtgat
gaagatgaggaagacgaggagtttgaggaagtagcagatgaccccattgttatggtggct
ggctgtccattctcctacagtgaagttagccagcggccggagctggtggcccagatgacc
ccagaagagaaggaagcatacatagccatgggccagcgtatgtttgaggatctctttgag
tga
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