Mus caroli (Ryukyu mouse): 110312073
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Entry
110312073 CDS
T05910
Symbol
Robo1
Name
(RefSeq) roundabout homolog 1 isoform X8
KO
K06753
roundabout, axon guidance receptor 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110312073 (Robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110312073 (Robo1)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
ROBO family
110312073 (Robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_J_second
Big_4
Motif
Other DBs
NCBI-GeneID:
110312073
NCBI-ProteinID:
XP_021041283
Ensembl:
MGP_CAROLIEiJ_G0020871
UniProt:
A0A6P5R856
LinkDB
All DBs
Position
16:67408013..68405930
Genome browser
AA seq
1606 aa
AA seq
DB search
MIAEPARFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYICVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVTAGDMGSYTCVAENMVGKA
EASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLILSCVATGSPAPTILWRKDGVLVSTQDSRIKQLESGVLQIRYAK
LGDTGRYTCTASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSKNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTAAENVKTETFAIKGLKPNAIYLFLVRA
ANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWT
VDQQSQYIQGYKILYRPSGASHGESEWLVFEVRTPTKNSVVIPDLRKGVNYEIKARPFFN
EFQGADSEIKFAKTLEEAPSAPPRSVTVSKNDGNGTAILVTWQPPPEDTQNGMVQEYKVW
CLGNETKYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVRQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSN
LTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVN
PSGQPTPYATTQLIQANLSNNMNNGPGDASEKHWKPPGQQKPEVAPIQYNIMEQNKLNKD
YRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQGGMNWADL
LPPPPAHPPPHSNSEEYNMSVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRG
AASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEDLGHMPHPPDRRRQPVSPPPPPRPI
SPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESS
VTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQD
AAGRRHFHASQCPRPTSPVSTDSNMSAAVIQKARPTKKQKHQPGHLRREAYADDLPPPPV
PPPAIKSPTVQSKAQLEVRPVMVPKLVSIEARTDRSSDRKGGSYKGREALDGRQVADLRT
NPSDPREAQEQPNDGKGRGTKAAKRDLPPAKTHLGQEDILPYCRPTFPTSNNPRDPSSSS
SMSSRGSGSRQREQANVGRRNMAEMQVLGGFERGDENNEELEETES
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagcctgctcgcttttacctctttggattaatatgtctctgttcaggctcc
cgtcttcgtcaggaagattttccaccccgcattgttgaacacccttcagacctgatcgtc
tccaaaggagaacctgccactctgaactgtaaagccgaaggccgccccaccccgacgata
gaatggtacaaaggtggggaaagagtggagacggacaaagatgacccgcgctcacaccgg
atgttgctgccaagtggatctttatttttcttacgcatagtccatggacggaagagtagg
cccgacgaaggggtctacatctgtgtagcaaggaattacctcggagaggctgtgagccac
aacgcatcgctggaggtagctatactacgggatgacttcagacaaaacccttcagatgtc
atggtggcggtaggtgagcctgcagtcatggaatgccagcctccacggggccatccagag
cccaccatctcctggaaaaaggatggctcacccctggatgataaagatgaaagaatcact
atacgaggaggaaaactcatgatcacttatacgcgtaaaagcgatgctggcaagtatgtt
tgcgttggcaccaacatggtgggggaacgggagagtgaagtcgcagagctaaccgtttta
gagagaccatcatttgtgaagagacccagtaatttggcagtgactgtggatgacagtgca
gaattcaaatgtgaggcccgaggagaccctgtgcctacagttcgatggaggaaagatgat
ggagagctgcccaaatccagatatgaaatccgagatgatcatactttgaaaattcggaag
gtgactgctggcgacatgggatcatacacttgtgtggcagaaaatatggttggcaaagct
gaagcttcagccactttgacagttcaagttgggtctgagccgccacattttgttgtaaag
cctcgggaccaggtggttgccttgggaagaacagtgacttttcagtgcgaagcaactgga
aatcctcaaccagctatcttttggaggagagaggggagtcagaatctgcttttttcctac
cagcctccacagtcctctagccgattttcagtttcccagacaggagacctcaccattacg
aacgtccagcggtctgatgtcggctactacatctgtcagactttaaatgttgctggaagt
atcatcacaaaggcctatttggaagtcactgatgtgattgcagaccggcctcccccagtc
attcggcaaggtcctgtgaatcagactgtagcagtggatggcactttaatcctcagctgt
gtggccacaggcagtccagcacccacaattctgtggaggaaggatggagtccttgtttca
acccaagattctcggatcaaacagctggagagtggcgtgctgcagatccgctacgctaag
ctgggtgacacgggtcggtacacctgcaccgcatcgacccccagtggtgaggccacgtgg
agcgcttacatcgaagtccaggaatttggagttccagttcaacctccaagacccaccgac
cccaatttaatccccagtgccccctcaaagcccgaagttacagatgtcagcaaaaacaca
gtcactttatcgtggcagccaaacttgaactcaggagcaaccccaacatcttatattata
gaagccttcagccatgcatctggtagcagctggcagacggcggcagaaaatgtgaaaaca
gaaacatttgccatcaaaggactcaaacctaatgccatttaccttttcctggtgagggca
gcaaatgcctatgggattagtgatccaagccaaatatccgatccagtgaaaacacaagat
gttccaccaaccagccaaggggtggaccacaagcaggtccagagagaactggggaatgtc
gtcttgcatctgcacaacccgaccatcctttcttcctcctcagtcgaagtgcactggacg
gtggaccaacaatctcaatatattcaaggctataaaattctctaccgcccatctggagcc
agccatggtgaatcggagtggttagtttttgaagtgagaaccccaacgaaaaacagtgtg
gtgatccccgatctcagaaaaggcgtcaactacgagattaaggctcgcccattttttaat
gagtttcaaggagcagacagtgaaatcaaatttgccaaaaccttagaagaagcaccaagt
gcccctccccgaagtgtaactgtatccaagaatgatggaaatgggactgcaatcctggtc
acttggcaaccgcctcctgaagacacacaaaatggaatggtccaagaatataaggtttgg
tgtctcggcaatgaaacgaagtatcacataaacaagacagtcgatggctcgaccttctcg
gtggtcatcccctctctggttcctgggatccgatacagtgtggaggtggcggcgagcact
ggggctggtcccggggtaaagagtgagcctcagttcatccagttagattctcacggaaac
cccgtgtctcccgaggaccaagtcagccttgctcagcagatctccgacgtggtgaggcaa
ccggcgttcattgcaggcatcggggcagcctgttggattatcctgatggtcttcagcatc
tggctttacagacaccgcaagaagagaaacgggctcaccagcacgtatgcgggtatccgg
aaagtaacttatcaaagaggaggcgaagccgtcagcagtggagggaggccgggactcctc
aacattagtgaacctgccacgcagccatggctggcagacacgtggcccaacacaggcaac
aaccacaatgactgctccatcaactgctgcacagccggcaatggcaacagcgacagcaac
ctgacaacctacagtcgcccagctgattgtatagccaattataacaaccaactggataac
aaacaaacaaatctgatgctccctgagtcaactgtttatggtgatgtggaccttagtaac
aaaatcaatgagatgaaaaccttcaatagcccaaatctgaaggacgggcgttttgtcaat
ccatcagggcagcccactccctatgccaccactcaactcatccaggcgaacctcagcaac
aatatgaataatggcccaggggacgccagcgagaagcactggaagcctccaggacagcag
aaaccggaagtggcaccaattcagtataacatcatggagcaaaacaaactgaacaaagat
tatcgggcaaatgacacaatccctccaaccatcccatacaaccagtcctatgaccagaac
acaggaggatcttataacagctcagatcggggcagtagtacatctggaagtcaaggccac
aagaaaggggcacggacgccaaaggcacccaagcagggtggtatgaactgggcagacttg
ctgccccctcctccggcgcatcctcccccacatagcaacagcgaagaatacaacatgtcc
gtagatgaaagctatgatcaagaaatgccctgtcctgtgccacctgcgcggatgtatttg
caacaggatgaattagaggaagaggaagatgaaagaggccccactccccctgtccggggg
gcagcttcttctccagctgctgtgtcctacagccaccaatccacggccactctcacccct
tctccccaggaagagctccagcccatgttacaggattgtccggaggacctcgggcacatg
ccccacccaccagacaggaggcggcagcccgtgagtcctcctccacctccacggccaatt
tccccacctcatacttacggctacatttcaggaccccttgtctcagatatggataccgat
gccccagaagaggaggaggacgaagctgacatggaagttgccaaaatgcagacccgaagg
ctgttgttacgtgggctcgagcagaccccagcatccagtgttggggaccttgagagctct
gtcactgggtccatgatcaatggctggggctcagcctcggaagaggacaacatttccagt
gggcgctccagtgtcagttcatccgatggctcctttttcactgatgctgattttgcccag
gcagttgctgcagctgcggagtatgcgggcctgaaagtggctcgccgccaaatgcaagat
gctgctggacgccgccacttccatgcctctcagtgcccgaggcccacgagtcctgtgtcc
acagacagcaacatgagtgctgctgtgatccagaaagccagacccaccaagaagcagaaa
caccagccaggacatctgcgcagggaagcctacgcagatgatcttccaccccctccagtg
ccaccacctgctataaaatcgcccactgtccagtccaaggcacagctggaggtacggcct
gtcatggtgccaaaactcgtatctatagaagcaagaacagatagatcgtcagacagaaaa
ggaggcagttacaaggggagagaagctctggatggaagacaagtcgctgacctgcgcaca
aatccaagtgaccccagagaagcacaggaacagccaaatgacgggaaaggccgaggaaca
aaggcagccaagagagaccttccaccagcaaagacgcacctcggccaagaagatattctt
ccatactgtagacctactttcccaacgtcaaacaaccctagagaccccagttcctccagc
tctatgtcatcaagaggatcagggagccgacaaagagagcaagcaaatgtgggccgaagg
aatatggcggaaatgcaagtacttgggggatttgaaagaggagatgagaataatgaagaa
ttagaggaaactgaaagctga
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integrated database retrieval system
