Mus caroli (Ryukyu mouse): 110312135
Help
Entry
110312135 CDS
T05910
Symbol
Atg13
Name
(RefSeq) autophagy-related protein 13 isoform X3
KO
K08331
autophagy-related protein 13
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04136
Autophagy - other
mcal04140
Autophagy - animal
mcal04211
Longevity regulating pathway
mcal05010
Alzheimer disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05017
Spinocerebellar ataxia
mcal05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110312135 (Atg13)
04136 Autophagy - other
110312135 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
110312135 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110312135 (Atg13)
05014 Amyotrophic lateral sclerosis
110312135 (Atg13)
05016 Huntington disease
110312135 (Atg13)
05017 Spinocerebellar ataxia
110312135 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
110312135 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110312135 (Atg13)
03029 Mitochondrial biogenesis [BR:
mcal03029
]
110312135 (Atg13)
Membrane trafficking [BR:
mcal04131
]
Autophagy
Autophagosome formation proteins
ULK complex
110312135 (Atg13)
Atg1 complex
110312135 (Atg13)
Mitochondrial biogenesis [BR:
mcal03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110312135 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
110312135
NCBI-ProteinID:
XP_021041343
Ensembl:
MGP_CAROLIEiJ_G0023967
UniProt:
A0A6P5R890
LinkDB
All DBs
Position
2:complement(85792298..85832387)
Genome browser
AA seq
516 aa
AA seq
DB search
METELSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTLTLSCAYRMNLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAEDAGVT
YPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAVLGLGSADLAYPVVFTAGLNTAHAHQL
MVPGKEGGVTLAPSHPAHGAQADPERLVMHMPSDGTHCAATPSSSEDTETVSNSSEGRAS
PHDILETIFVRKVGAFVNKPINQVTVTSLDIPFAMFAPKNLELEDADPMVNPPESPETTS
PLHGSLHSDGSSRGSGGSTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSI
DFGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgaactcagctcccaggacaggaaggacctggacaagtttattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggagaaaagatttgcacccgc
tcatcatcttccccaacgggttcagattggttcaatttagcaatcaaagacatcccagaa
gtcacccatgaagcaaagaaggccctgtcagggcagctgcctgctgtggggcgatctatg
tgtgtggagatctcactcaagacttctgagggagattctatggagttggaaatttggtgt
cttgaaatgaacgaaaagtgtgacaaagaaatcaaagtttcctacactgtatacaaccga
ttgtcactgctgctgaagtctcttctcgctattacaagggtgacaccagcctatcgactc
tccaggaagcaagggcatgagtatgtcattttgtacaggatttattttggggaagttcag
ctgaatggcttaggagaaggcttccagacagttcgagttggaacagtgggcacccctgtg
ggcaccctcactctttcctgtgcttatagaatgaacttggcattcatgtccaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgttgaccgcccctat
cccagctcttctcctatgcacccctgcaattacagaactgctgaggatgcaggagtcaca
tacccatcagtggaagactctcaggaagtgtgtaccacatctttttccacatcccctccc
tcccagctctcaagctctcgcctttcctatcagcctgctgtcctgggccttggatcggct
gacctggcttatccagtagtgtttactgctggcttaaacactgcacacgctcaccagctg
atggttcctggaaaggaaggcggggtaactcttgctcccagccaccctgctcatggtgcc
caggctgatcccgagagactggtgatgcacatgccttctgatgggacccattgtgccgcc
acgccctcaagcagtgaggacactgagactgtgtctaacagcagtgaaggacgggcctca
ccccatgacatcttggagactatctttgtccgaaaagtgggagcatttgtcaacaaaccc
atcaatcaggtgactgtgacgagtttggacatacctttcgccatgtttgctcccaagaat
ttggagctggaggatgctgatcctatggtgaatcccccggagtccccagagaccacatct
cccctccatggcagcctgcactcagatggctccagcaggggcagcgggggcagcacacat
gacgactttgttatgattgactttaagccagctttttctaaagacgacattcttccaatg
gacctggggaccttttaccgtgaatttcagaacccccctcagctgagcagcctctccata
gattttggagctcagtctatggcggaagacttggactccttaccagagaagctggctgtg
catgagaagaatgtccgagaattcgatgcctttgtggaaaccctgcagtaa
DBGET
integrated database retrieval system
