Mus caroli (Ryukyu mouse): 110312327
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Entry
110312327 CDS
T05910
Symbol
Lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110312327 (Lrp4)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110312327 (Lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
Vgb_lyase
SGL
cEGF
DUF5050
EGF_LRP2
EGF_CA
EGF
Motif
Other DBs
NCBI-GeneID:
110312327
NCBI-ProteinID:
XP_021041479
Ensembl:
MGP_CAROLIEiJ_G0023962
UniProt:
A0A6P5R942
LinkDB
All DBs
Position
2:85575016..85631975
Genome browser
AA seq
1905 aa
AA seq
DB search
MRRWWGALLLGALLCAHGIASSLECACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDH
SDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFPCQNG
YCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEE
SCPSAVPSPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSGEFMCDS
GLCINSGWRCDGDADCDDQSDERNCTTSMCTAEQFRCRSGRCVRLSWRCDGEDDCADNSD
EENCENTGSPQCASDQFLCWNGRCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNV
NNGGCAQKCQMVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWC
EAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRE
LVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANL
DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP
NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHT
KSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNY
TCACPTGFRKINSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDW
DSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRI
EVANTDGSMRTVLIWENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASSRQVIISS
NLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGQRIYW
TDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRQRPPVMTPCAVENGGCSHLCLRS
PNLSGFSCTCPTGINLLRDGKTCSPGMNSFLIFARRIDVRMVSLDIPYFADVVVPINMTM
KNTIAIGVDPLEGKVYWSDSTLHRISRASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYW
TDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGS
DRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVSPVQHPYGLTL
LDSYIYWTDWQTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDRAQPLGFNKCGSRNGGC
SHLCLPRPSGFSCACPTGIQLKGDRKTCDPSPETYLLFSSRGSIRRISLDTDDHTDVHVP
VPGLNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVAR
NLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGHIAKIERAN
LDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPF
ALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVVSPQRQTGTNACGVN
NGGCTHLCFARASDFVCACPDEPDGHPCSLVPGLVPPAPRATSMNEKSPVLPNTLPTTLH
SSTTKTRTSLEGAGGRCSERDAQLGLCAHSNEAVPAAPGEGLHVSYAIGGLLSILLILLV
IAALMLYRHRKSKFTDPGMGNLTYSNPSYRTSTQEVKLEAAPKPAVYNQLCYKKEGGPDH
SYTKEKIKIVEGIRLLAGDDAEWGDLKQLRSSRGGLLRDHVCMKTDTVSIQASSGSLDDT
ETEQLLQEEQSECSSVHTAATPERRGSLPDTGWKHERKLSSESQV
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggtggtggggcgcgctgctgcttggcgccctgctctgcgcacacggaatagcc
agcagtctggagtgtgcatgtggtcggagccacttcacatgtgcagtgagcgcgcttggc
gaatgtacctgtatccccgcccagtggcagtgtgatggagacaatgactgtggagaccac
agcgatgaggatggctgtacgctgcctacctgctcccctctggacttccactgtgacaac
ggcaagtgcatccgacgctcgtgggtgtgtgacggggacaatgactgtgaagatgactct
gatgagcaggactgtcccccccgggagtgcgaggaggacgaattcccctgccagaacggc
tactgcattcggagtctgtggcactgtgatggggacaacgactgtggtgacaacagtgac
gagcaatgcgacatgcgcaagtgctcagacaaggaattccgctgcagcgacggcagctgc
attgctgaacattggtactgcgatggtgacacagactgcaaagatggctctgatgaggaa
agctgcccttcagcagtaccttctcctccttgcaacctggaagagttccagtgcgcctat
ggccgctgcatccttgacatctaccattgtgacggagatgacgactgtggagactggtca
gacgagtctgactgctcctcccaccagccctgccgctctggggaatttatgtgtgacagt
ggcctgtgcattaactcgggctggcgctgtgacggtgatgcggactgtgatgaccagtct
gatgaacgcaactgcaccacctccatgtgcacagccgaacagtttcgctgtcggtcaggc
cgttgcgtccgtctgtcctggcgctgtgatggggaggatgactgtgcggacaacagtgat
gaagaaaactgtgagaacacaggaagcccccagtgcgcctctgatcagttcctgtgttgg
aacgggcgctgtattgggcagaggaagctgtgcaacgggatcaacgactgcggtgacagc
agtgacgaaagtccacagcagaactgtcggccccggacgggtgaggagaactgcaatgtt
aacaacggtggctgtgcccagaagtgtcagatggtgcgaggggcagtacagtgtacctgc
cacacaggctaccggctcacagaggatgggagaacatgccaggatgtaaacgaatgtgct
gaggaggggtactgcagccagggctgcacaaacagtgaaggggctttccagtgctggtgt
gaagcagggtatgagctacggcccgatcggcgcagctgcaaagctctggggccagaacct
gtgctactgtttgccaatcgtatcgacatccggcaggtgctcccgcaccgctccgagtat
acactgctactgaacaacctggagaacgccattgccctcgactttcatcacaggcgggag
ctggtcttctggtcggatgtcaccctggaccgcatcctccgtgccaaccttaatggcagc
aatgtagaggaggtggtgtctactgggctagagagcccagggggcctagcagtggattgg
gtccatgacaagctctactggaccgactctgggacgtcgaggattgaggtggctaatctg
gatggggcccaccggaaggtactgctgtggcagagcctagagaagcccagagccattgcc
ctacaccccatggagggaaccatttattggacagactggggcaacaccccccgcatcgag
gcctccagcatggacggctctgggcgtcgaatcattgctgacactcatcttttctggccc
aacggcctcaccatcgactacgctggtcgacgcatgtactgggtggatgctaagcaccac
gtcatcgagagggccaatctagatgggagtcaccgcaaggctgtcattagccagggcctc
ccacatccctttgccatcacagtgtttgaagacagcttgtattggacagactggcacacc
aagagcatcaatagtgccaacaagtttacagggaagaaccaggaaatcattcgcaacaag
ctccactttcctatggacattcataccttgcacccccagcgccagcccgcagggaaaaac
cgctgtggggacaacaatggaggttgcactcacctgtgtctacccagtggccagaactac
acctgtgcctgccccaccggcttccgcaagatcaacagccacgcctgtgcccagagtctt
gacaagttcctgctttttgcccgaaggatggacatccgtcggatcagcttcgacacagag
gacctgtccgacgatgtcatcccactggctgacgtgcgcagtgctgtggcccttgactgg
gactcccgggatgaccacgtgtattggacagatgtcagcactgataccatcagcagggcc
aagtgggatggaacaggacaggaggtggtagtggataccagtttggagagccctgctggc
ttggcaattgattgggtcaccaacaagctctactggacagatgcaggcacggacaggatc
gaagtggccaacacagatggcagcatgaggacagtgctcatctgggagaaccttgaccgt
cctcgggacatagtggtggagcccatgggcgggtacatgtattggactgactggggtgca
agtcccaagattgaacgggccggcatggatgcctccagccgacaagtcatcatctcttcg
aacctgacctggcctaatggattggctattgactacggctctcagcggctgtactgggca
gatgccggcatgaagactattgaatttgctgggctggatggcagcaagaggaaggtacta
atcggaagccagctcccccaccctttcgggctgactctgtatggacagcgcatctattgg
actgactggcagaccaagagtatacaaagtgctgaccggctgaccgggctagaccgggag
actctgcaggagaacctagagaacctcatggacattcatgtcttccaccgccagaggcct
ccagtgatgacgccgtgtgctgtggagaatggcggctgtagccatttgtgtctcaggtcc
ccaaatctgagcggcttcagctgcacctgccccacaggtatcaacctactgcgagatggc
aagacatgctcaccaggcatgaacagtttcctcatcttcgccaggaggattgatgttcgc
atggtctccttggatatcccttattttgctgatgtggtggtacccatcaacatgaccatg
aagaacaccatcgccattggagtggacccgctggaaggaaaagtgtattggtctgacagc
acgctgcacaggatcagccgtgccagcctggatggctcacagcatgaggacatcatcact
acaggtctgcagaccacagacggacttgcagtggacgccatcggccggaaagtgtactgg
acagacacaggaacgaatcggattgaagttggcaacctggatgggtctatgcggaaagtg
ttggtgtggcagaaccttgacagtccccgggccattgtattataccatgaaatggggttc
atgtactggacagactggggggagaacgccaaattagagcgttctggaatggatggctca
gaccgtactgtgctcatcaacaacaacctagggtggcccaatggactgactgtggacaag
accagttcccaactgctgtgggctgatgcccatactgagagaattgaggtggcggacctg
aatggcgctaatcggcatacactggtgtcaccagtccagcacccatatggcctcactctg
cttgactcctatatctactggaccgactggcagacccgcagcatccaccgggccgacaag
agtactggcagcaatgtcatccttgtgaggtccaacctgccaggcctcatggatatccaa
gctgttgaccgggcacagccactgggttttaataagtgtggctcaagaaatggcggctgt
tcccacctctgtttacctcggccttctggtttctcctgtgcctgtcccactggcattcag
ctgaagggagacaggaagacctgtgacccctctccagaaacctacctgctcttctctagc
cgaggctccattcgccgtatctcactggacaccgatgaccacacagacgtgcacgttcct
gttcctgggctcaacaatgtcatctccctagactatgacagtgtggatggaaaggtctat
tacacagacgtgttcctggatgttatcaggcgagcagacctgaatggcagcaacatggag
acagttattggacacgggcttaagaccactgacgggctggcagtggactgggttgccaga
aacctgtactggacagataccggacgaaataccatcgaagcatctcggctagatggatcc
tgtcgcaaagtgctaatcaacaacagtctagacgagccccgggccattgctgttttcccc
agaaaggggtacctcttctggacagactggggccacattgccaagattgaacgggcaaac
ctggatggctctgagaggaaggtcctcatcaacacagacctaggctggcccaacggcctc
accttggactatgatacccgcaggatctactgggtagatgcacatctggatcggatcgag
agtgccgacctcaatgggaagctgaggcaggtcttggtcagccatgtgtcccaccccttt
gccctcacacagcaggacaggtggatctactggacggactggcagaccaaatccatccaa
cgtgtcgacaagtactctggccgcaacaaggagacagtgctggccaacgtggagggactc
atggatatcattgtggtgtcccctcagcggcagacagggaccaatgcctgcggtgtgaac
aatggtggctgtacccacctctgctttgccagagcctctgactttgtgtgcgcgtgtcct
gatgagcctgacggtcatccctgctcccttgtacctggccttgtgcctcctgctcccaga
gctaccagcatgaatgagaagagcccagtgctacccaacacgctgcccaccaccttacat
tcttctaccaccaaaacccgtacctctctggagggggcaggaggaagatgctctgaaagg
gatgcccagctgggcctctgtgcacattccaatgaagccgttcctgctgctccaggtgaa
ggactgcatgtcagctatgccatcggtggactcctcagtatcctgctgattttgttggtg
atcgcggctttgatgctatacagacacagaaaatccaagttcacggatcctggaatggga
aacttgacctatagcaacccctcctaccgaacttccactcaggaagtgaaacttgaagca
gctcccaagccagccgtgtataatcagctgtgctataagaaagagggtggacctgaccac
agctacaccaaggagaagatcaagattgtagagggaatccgcctcctggctggggatgac
gctgaatggggtgacctcaagcaactgcgcagctccagggggggccttctacgggatcac
gtatgcatgaagacagacacagtgtccatccaggccagctctggctccctagatgacacg
gagacagagcagctgctgcaggaagagcagtctgagtgtagcagtgttcacactgcagcc
actccagagagacggggctctctgccagacacaggctggaaacacgaacgcaagctctcc
tcagaaagccaggtctaa
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