Mus caroli (Ryukyu mouse): 110312343
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Entry
110312343 CDS
T05910
Symbol
Ptprm
Name
(RefSeq) receptor-type tyrosine-protein phosphatase mu isoform X6
KO
K05693
receptor-type tyrosine-protein phosphatase mu [EC:
3.1.3.48
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04514
Cell adhesion molecules
mcal04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110312343 (Ptprm)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110312343 (Ptprm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcal01009
]
110312343 (Ptprm)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110312343 (Ptprm)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
110312343 (Ptprm)
Protein phosphatases and associated proteins [BR:
mcal01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
110312343 (Ptprm)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
Type II RPTP family
110312343 (Ptprm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
ig
PTP-SAK
DSPc
Tc-R-P
TM_ErbB1
Pur_ac_phosph_N
I-set
PTPlike_phytase
Y_phosphatase3
Ig_3
PTP_tm
ECSCR
Ig_2
EphA2_TM
DctM
DUF948
Motif
Other DBs
NCBI-GeneID:
110312343
NCBI-ProteinID:
XP_021041506
Ensembl:
MGP_CAROLIEiJ_G0021841
UniProt:
A0A6P5R2K3
LinkDB
All DBs
Position
17:complement(62791052..63473200)
Genome browser
AA seq
1465 aa
AA seq
DB search
MRTLGTCLVTLAGLLLTAAGETFSGGCLFDEPYSTCGYSQADEDDFNWEQVNTLTKPTSD
PWMPSGSFMLVNTSGKPEGQRAHLLLPQLKENDTHCIDFHYFVSSKSNAAPGLLNVYVKV
NNGPLGNPIWNVTGDPTRTWHRAELAISTFWPNFYQVIFEVVTSGHQGYLAIDEVKVLGH
PCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRR
FIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWI
QLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGE
GGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYG
YQVGGQEQVREEVSWDTDNSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELTVQTDED
LPGAVPTESIQGSAFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVS
KLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYEFETPLNQT
DNTVTVMLKPAQSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASILNSQYY
FAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPHKSYRIYYQAASRANGETKIDCVRVA
TKGAVTPKPVPEPEKQTDHTVKIAGVIAGILLFVIIFLGVVLVMKKRKLAKKRKETMSST
RQEMTVMVNSMDKSYAEQGTNCDEAFSFMGTHNLNGRSVSSPSSFTMKTNTLSTSVPNSY
YPDPFVPTAILVPINDETHTMASDTSSLAQPHTYKKREAADVPYQTGQLHPAIRVADLLQ
HITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQMLEG
DNNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVK
CCKYWPDDTEIYKDIKVTLIDTELLAEYVIRTFAVEKRGIHEIREIRQFHFTGWPDHGVP
YHATGLLGFVRQVKSKSPPNAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCV
RELRSRRVNMVQTEEQYVFIHDAILEACLCGDTSIPASQVRSLYYDMNKLDPQTNSSQIK
EEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDILPPDRCLPFLITIDGESSNYINAAL
MDSYKQPSAFIVTQHPLPNTVKDFWRLVLDYHCTSVVMLNDVDPAQLCPQYWPENGVHRH
GPIQVEFVSADLEEDIISRIFRIYNASRPQDGHRMVQQFQFLGWPMYRDTPVSKRSFLKL
IRQVDKWQEEYNGGEGRTVVHCLNGGGRSGTFCAISIVCEMLRHQRTVDVFHAVKTLRNN
KPNMVDLLDQYKFCYEVALEYLNSG
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgaggacacttgggacttgcctggtgactttagctggacttttgctaactgcggccgga
gaaacattttcaggtggctgcctctttgatgaaccatacagcacatgtggatatagtcaa
gctgacgaagatgacttcaactgggagcaggtgaacaccctgaccaaaccgacctctgac
ccctggatgccatcaggctccttcatgctggtcaacacttctgggaaaccagaaggccag
agagctcacctgctcctgcctcagcttaaggaaaacgacacccactgcatcgactttcac
tactttgtatccagcaagagtaatgctgctcccgggctgctcaatgtctatgtgaaggtg
aataatggaccactggggaatcccatctggaacgtaaccggagaccccacccgcacgtgg
cacagggcagagctggccatcagcacgttctggcccaacttttaccaggtgatttttgaa
gttgtgacctctggccatcaaggctaccttgctatcgatgaagttaaggtcttaggacac
ccgtgcacaagaactccccacttcctgcggattcagaatgtggaggtgaatgccggccag
tttgctaccttccagtgcagcgccataggcaggacagtggctggggaccggctctggctg
cagggaattgatgtccgagatgcccctctgaaggagataaaggtgactagttccagaaga
ttcatagcctcgtttaacgttgtaaacacgaccaagagagacgctgggaagtatcgctgc
atgattcgcacagaaggaggtgtcgggatatcaaactacgcagaattggtagttaaagag
ccacctgttcccatcgccccacctcagctcgcctctgtcggagcaacctatctgtggata
cagctcaatgccaactccatcaatggggatggacccattgtggcccgcgaggttgagtac
tgcacagccagtgggagctggaatgatcggcagccagtggattccacgagttacaagatt
gggcaccttgacccagacacagagtatgagatcagtgtgcttctaaccagaccaggagaa
ggcggcactggatctcccgggccagctctgagaacaagaacaaagtgtgccgatcccatg
cgtggcccgagaaaactagaagttgtggaggtcaaatctcgacaaatcaccatccgctgg
gagccgtttggatacaatgtaactcgttgccacagttataatctcacagtgcactatggt
taccaggttggagggcaggagcaggtgcgagaagaagtgagctgggatacagataactcc
caccctcagcacaccatcaccaacctgtccccgtacaccaacgtcagcgtgaaactcatt
ctgatgaacccggagggccgcaaggaaagtcaagaactcacggtgcagacggatgaagac
ctcccaggagctgtccccactgaatccatccaaggcagtgcctttgaagaaaagatattt
ctccagtggagagagccgacacaaacatatggggtcatcactttatacgagatcacctac
aaagcagtcagttcctttgacccggaaatagatttatccaaccaaagtgggcgagtctca
aaactgggaaatgaaacccattttctgttctttggcctgtatcctggaacgacgtactcc
ttcaccatcagagccagcacagcgaaggggtttggacctccggcaacaaaccagttcacc
acaaaaatatcagcaccatctatgccagcctatgaatttgagacacctttgaatcagact
gataatacagtgactgtgatgctgaaacctgcacaaagcagaggggctccagtcagtgtc
tatcaaattgttgtcgaggaagaacgtcctcggagaacaaagaagacaacagagatcttg
aagtgctacccagtgccgattcacttccagaacgcttccatcctgaactcacagtactac
tttgctgcagaatttcccgccgacagcctccaagctgctcaaccatttaccattggtgac
aataagacatacaatggctactggaacacccccctcctcccccataagagctacagaatt
tattaccaagctgctagtcgagccaatggggaaaccaaaattgactgtgtccgagtggcc
acaaaaggggccgttactccaaagcctgtccctgaacccgagaaacaaacagatcacacg
gttaaaatcgccggagtgattgcaggcatcttgctgtttgttatcatatttcttggagtc
gtgctggtcatgaagaagaggaaactggccaagaagaggaaggagacgatgagcagcacc
cggcaggagatgacagtgatggtgaattctatggacaagagctatgctgagcaaggcacc
aactgcgacgaagccttctctttcatgggcacacacaaccttaatgggagatctgtgtcc
tcgccatcatcctttacaatgaaaacaaacacgctgagcacatcggtgccgaattcctat
tacccagacccatttgtgccaactgcaatcttagtgccaatcaatgatgagacccacaca
atggccagcgacaccagcagcctggcacagccccatacttataagaaacgcgaggccgca
gatgtgccttaccagactgggcagcttcacccggccatccgtgtggcagacctcctccaa
cacatcactcagatgaagtgcgctgagggctatggcttcaaggaggagtatgagagcttc
tttgaaggacagtctgcaccatgggactctgctaagaaagacgagaacagaatgaagaac
agatacgggaacatcattgcatatgatcactctcgggtacggctccagatgctggaaggg
gacaacaattcagactatatcaatggcaattacatcgatggctatcatcgacccaatcat
tatattgcaacccaaggacccatgcaggagactatctatgacttctggaggatggtgtgg
catgagaacacagcaagcatcatcatggtgaccaaccttgtggaagtgggaagggtgaaa
tgctgtaaatactggccagatgacaccgagatctacaaagacattaaagtcaccctaata
gatacagagctgctggcagaatatgtgataagaacgtttgctgtggaaaagagaggcatt
catgaaatccgagagatcagacagtttcacttcacgggctggccagaccacggagtcccc
taccatgccactggcctgctgggatttgtccggcaggtcaaatccaagagcccacccaat
gcaggcccgctggtggtacactgcagtgctggagcaggaaggacaggttgcttcattgtt
atcgatatcatgctggacatggcagaaagggaaggagtggtggacatctacaactgtgtc
agagagcttcggtccaggagagtcaacatggtgcagacagaggagcagtacgtctttatc
catgatgcgatcctggaagcctgtctttgtggagacacctccatccctgcctcccaagtc
aggtctctctattatgacatgaacaaactggacccacagacaaactcaagccaaattaaa
gaggaattccggactctcaacatggtgacccccaccctgcgtgtggaggactgcagcatc
gcactcctaccccggaaccacgagaaaaatcgctgcatggacatcctgcctccagaccgc
tgtctgcccttcctcatcaccatcgatggagagagcagcaactacatcaatgcagcccta
atggacagctataaacagccttcagcatttatagtcacccagcatcctttgccaaacacc
gtcaaagacttctggcgactggtcttggattaccactgcacatccgtagttatgctgaac
gatgtggatcctgcccagctgtgtccacagtactggccagaaaatggagtgcacagacat
ggccccatccaggtggaattcgtgtctgcagacttagaagaagatatcatcagcagaatt
ttcaggatttacaacgcctccagaccccaggatggacatcggatggttcagcagttccag
ttcctgggctggccgatgtacagggacacgcccgtgtccaagcgctccttcttgaagctc
atacgccaggtggacaagtggcaggaagaatacaatggcggcgaaggccgcacagtcgtg
cactgcttgaacggaggaggccgcagtggtacattctgtgccatcagcattgtctgtgag
atgctccgacaccagagaactgtggatgtcttccatgctgtcaagacattgaggaacaac
aagccaaacatggtggacctcctggatcagtacaagttctgctatgaggtggccctggag
tacctgaattcgggctga
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integrated database retrieval system
