Mus caroli (Ryukyu mouse): 110312403
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Entry
110312403 CDS
T05910
Symbol
Bnip1
Name
(RefSeq) vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110312403 (Bnip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110312403 (Bnip1)
Membrane trafficking [BR:
mcal04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
110312403 (Bnip1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
DUF6236
DUF2777
CATRA-C
Spectrin_Anc-1_2
COG3_N
Sec16
STX6_10_61_N
Phage_GP20
Motif
Other DBs
NCBI-GeneID:
110312403
NCBI-ProteinID:
XP_021041622
Ensembl:
MGP_CAROLIEiJ_G0021285
UniProt:
A0A6P5RF34
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All DBs
Position
17:22630761..22642293
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AA seq
228 aa
AA seq
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MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSELTELNTKVKEKFQQLKQRIQD
LEQSAREQDKESEKQLLLQEVENHKKQMLSNQTSWRKANLTCKLAIDNLEKAELLQGGDS
LRQRKTTKESLAQTSSSITESLMGISRMMSQQVQQSEEAMQTLVSSSRTLLDANEEFKSM
SGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccccaggatgtccacgtccggatctgtaaccaagagattgtcaaattcgac
ctggaggtgaaggcgcttatccaggatattcgagattgttctggacccttaagtgagctt
actgaactgaatactaaggtgaaagaaaagttccaacagttaaaacagaggatccaggat
cttgaacagtcagcaagggagcaagacaaggagtcagagaagcagcttctacttcaggaa
gtggagaaccacaaaaagcagatgctcagcaaccagacctcatggcgaaaagccaatctt
acctgcaagcttgctatcgacaacctggagaaggcagaacttctgcaaggaggagactcc
ttacggcaaaggaaaaccaccaaagagagtttggcccagacctccagctccatcacagag
agtctcatggggatcagcaggatgatgtcacagcaggtgcaacagagcgaggaggctatg
cagactctagtcagctcctcacggactctcctggatgcaaacgaagagtttaagtccatg
tcaggaaccatccagttgggccggaagctcatcacaaagtacaaccgccgagaactgacg
gacaagctgctcatcttcctggccctggccctgttcctcgctacagttctctatattgtg
aaaaagcgcctctttccatttttgtaa
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