Mus caroli (Ryukyu mouse): 110312444
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Entry
110312444 CDS
T05910
Symbol
Gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110312444 (Gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110312444 (Gtf2f1)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
110312444 (Gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
110312444
NCBI-ProteinID:
XP_021041696
Ensembl:
MGP_CAROLIEiJ_G0021799
UniProt:
A0A6P5R2Y6
LinkDB
All DBs
Position
17:complement(53604682..53612933)
Genome browser
AA seq
508 aa
AA seq
DB search
MAALGSSSQNVTEYVVRVPKNTAKRYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTE
NTAYYIFTQCADGAFEAFPVQNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEDEEEKEKRSRKKPSELRIHDLEDDLEMSSDASDASGEEGSRTSKAKKKAPV
TKAGRKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSSPDETEGKPKVPQQEDGPKG
VDEQSESSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSDDSDSSEESDIDSETSSA
LFMAKKKTPPKRERKPSGGSSKGTSRPGTPSAEAASTSSTLRAAASKLEQGKRTSETPAA
KRLRMDTGPQSLSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKKTGLSSEQT
VNVLAQILKRLNPERKMIGDKMHFSLKE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctaggctccagcagccagaatgtcaccgagtacgtcgtccgagtccccaag
aacacagccaaaagatacaacataatggcttttaatgcagccgataaagtcaactttgct
acctggaaccaggcacggctggagcgagatctgagcaacaagaagatttaccaggaagaa
gagatgccagagtctggtgcaggcagtgaattcaaccgcaagctcagggaggaggcacgc
cggaagaagtacggcattgtcctaaaggagtttcggcctgaggaccagccttggctactc
cgggtcaatggcaaatcaggacggaagttcaaaggcattaagaaaggcggggtaacagag
aacacagcctactacatcttcacacagtgtgctgatggtgcctttgaggctttccctgta
cagaactggtacaatttcacaccactggcccgacaccgcacactcactgctgaggaagcc
gaggaggaatgggagaggaggaacaaggtcctaaaccacttcagcatcatgcagcagcgg
cggctcaaggaccaggaccaggatgaagatgaggaggagaaggagaagcgcagtcgaaag
aagcctagtgagctgcgcattcatgacctggaggatgacctggaaatgtcctccgatgcc
agcgatgccagtggcgaagagggcagcagaacctccaaggctaagaaaaaggccccagtg
accaaggcaggcaggaagaagaaaaagaagaagggctcagatgatgaggcttttgaggac
agcgatgatggggacttcgagggccaggaggtagactacatgtctgatggctccagcagc
tctccagatgaaacagaaggcaagcccaaagtgccccagcaggaggatggcccaaagggg
gtggatgagcagagcgagagcagtgaggagagtgaggaggagaagccccccgaggaagac
aaggaggaggaagaagagaagaaggcccctaccccacaagagaagaagcgcaggaaagac
agcagtgatgactccgacagctcagaagagagcgacattgacagtgagacctcctctgca
ctcttcatggcgaagaagaagacacccccaaagagggagcggaagccatcgggagggagt
tcaaagggcaccagtcggccaggaactcccagtgcagaagcagcaagcacttcttctacc
ctgcgggctgcagccagcaagctggagcaggggaagcggacgagtgagactccagcagcc
aagcgtcttcggatggacacgggtccccagagcctgtctgggaagtccacacccagcagc
ggtgatgtccaggtgacagaggatgctgtgcgccgctacctgacccgcaagcccatgacc
acaaaggacctgctgaagaagttccagaccaagaagacagggctgagcagcgagcagaca
gtaaatgtgctggcgcagatcctcaagcgcctcaaccctgagcgcaagatgattggtgat
aagatgcacttctccctcaaagagtga
DBGET
integrated database retrieval system
