Mus caroli (Ryukyu mouse): 110312446
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Entry
110312446 CDS
T05910
Symbol
Khsrp
Name
(RefSeq) LOW QUALITY PROTEIN: far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110312446 (Khsrp)
03041 Spliceosome [BR:
mcal03041
]
110312446 (Khsrp)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110312446 (Khsrp)
Spliceosome [BR:
mcal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110312446 (Khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
110312446
NCBI-ProteinID:
XP_021041701
Ensembl:
MGP_CAROLIEiJ_G0021800
UniProt:
A0A6P5R8Z4
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Position
17:complement(53623833..53633865)
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AA seq
742 aa
AA seq
DB search
MSDYNTGGPPPGPPPPAGGGGGAAGAGGGPPPGPPGAGDRGGGGPGGGGPGGGGASGGPS
QPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNNTPDFGFGGQKRQLEDGDQPD
SKKLASQGDSIGSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSSCKVQ
ISPDSGGLPECSRSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIM
IPAGKAGLVIGKGGETIKQLQERAGVKMILIQXGSQNTNVDKPLRIIGDPYKVQQACEMV
MDILQERDQGGFGDLNEYGSGVGGGIIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQF
KQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQG
NWGPPGGEMTFSIPTHKCGLVIGRDRENVKAINQQTGAFVEISRQLQPNRDPNFKLFVIR
GSPQQIDHAKQLIEEKIEGXGPGPGPARPMGPFNPGPFNQGPPGAPPHAAGPPPHQYPPQ
GWGNTYPQWQPPAPHDPNKAAAAATDPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQG
EPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPG
APPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQASGNCHPPPPPFSFQP
PATVHPALVGSAGNPFPCGVCP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacaacaccggaggtcccccgcccggcccgccacctcccgctggcggcggc
ggaggagccgcgggtgcgggaggaggccctccgccgggcccgccgggcgcgggagaccgg
ggcggcggaggccctggcggcggcggcccgggtggaggaggcgcgtccgggggcccctca
cagcctcccggtggcggcggccctgggatccgcaaggacgccttcgccgacgccgtgcag
cgggcccgccagattgcagccaaaatcggaggtgatgctgctaccaccgtgaataacaac
actcctgattttggctttgggggccaaaagagacagctggaagatggagaccagccagac
agcaagaaactggcttcccagggagactcgattggttctcaactgggacccatccatcct
ccccccaggacctcaatgacagaagagtatagggttccggatggcatggtgggcttgatc
attggcagaggtggtgagcagataaacaaaatccagcaggactcaagctgcaaagttcag
atctcaccagatagtggtggcctccctgagtgcagcaggtctctgactggagcacctgag
tctgtccaaaaggcaaagatgatgctggatgacatcgtgtctcggggccgtgggggcccc
ccaggacagttccacgacaacgccaatgggggtcagaatggcacagtgcaggagatcatg
atccctgctggcaaagctggcctggtcattggtaaaggtggagagaccatcaagcagctg
caggagcgggctggggtgaagatgattttaattcagnatggctcccagaacacaaatgtg
gacaagccactgcggattatcggggacccatacaaagtacagcaagcctgcgagatggtg
atggacatcctgcaagaacgtgatcaaggtggctttggggacctcaatgaatacggatct
ggggttggtggaggcattattgatgtgcctgtacccaggcattcagttggtgtagtcatt
ggccggagtggagaaatgatcaagaagatccagaatgatgccggtgtgcgcatccagttc
aagcaagatgatgggaccggccctgagaagattgctcacatcatggggcctccagatcgg
tgtgaacatgcagcccggatcatcaatgacctcctccagagtcttcggagtgggcccccg
ggtcctccaggggcccctggcatgccccctgggggcaggggccggggccgaggccaaggc
aactggggccctcctggaggggagatgactttctccattcctacccataagtgtgggctg
gtcattggcagagacagggagaatgtgaaggccattaaccagcagacaggcgcctttgtg
gaaatatctcggcagctgcagcccaacagggaccccaatttcaagttgtttgtgatccgg
ggatcgccccagcagattgaccatgcaaagcagctcattgaggagaagatagagggtnca
ggccctggaccaggccctgctagacccatggggcctttcaaccctggacccttcaaccag
gggcctccaggggcacccccacatgctgctggtccccctcctcaccagtacccgcctcag
ggctggggcaatacctacccccagtggcaaccacctgcccctcacgacccaaacaaagct
gctgcagcggctacagatcctaatgctgcctgggctgcctactactctcactactaccag
caacccccaggtcccgtgccaggccctgccccagcccctgcagccccacctgcacagggg
gagcccccccagcctccacccactggccaatcagactacaccaaggcttgggaagagtat
tacaaaaaaattggccagcagccccagcagcctggggcacccccacagcaggactacacc
aaggcctgggaggagtactacaagaagcaagcacaagtggccactggtgggggtcctgga
gcaccccctggctcccagcctgattacagtgctgcctgggctgagtattacagacagcag
gctgcttactacggacagaccccaggccctggtggcccacagccacctcccacccagcag
ggacagcagcaggcaagtgggaactgccaccctcctcctcctcctttctccttccaaccc
ccggccaccgtccatcctgccttagtgggtagcgccggaaaccctttcccctgcggggtg
tgcccttga
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