Mus caroli (Ryukyu mouse): 110312501
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Entry
110312501 CDS
T05910
Symbol
Traf7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110312501 (Traf7)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110312501 (Traf7)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110312501 (Traf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_SCAP
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
NBCH_WD40
Beta-prop_SPT8
WD40_like
zf-RING_UBOX
zf-C3HC4
Beta-prop_DCAF4
zf-C3HC4_2
zf-TRAF
zf-C3HC4_4
Sina_ZnF
Beta-prop_IFT140_2nd
Beta-prop_EIPR1
zf-C3HC4_3
Beta-prop_Nup120_160
zf-RING_5
PKcGMP_CC
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Filament
DUF4164
U-box
DUF16
Crescentin
Motif
Other DBs
NCBI-GeneID:
110312501
NCBI-ProteinID:
XP_021041804
Ensembl:
MGP_CAROLIEiJ_G0021190
UniProt:
A0A6P5R3B3
LinkDB
All DBs
Position
17:complement(20329887..20340449)
Genome browser
AA seq
670 aa
AA seq
DB search
MSLAKSARYNRFSGGPANLPSSDSSGTRMETTFGPTFSTVTTITKAADGTGTYKQHRRTP
SSSSTLAYSPRDEEDGMPPINTPRRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCRHGCHAAGTGKPGVFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHE
MHVALAQKDQEIAFLRSMLGKLSEKIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQTLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQT
IKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcttagccaagagtgcccgctacaaccgcttctccgggggacctgccaacctcccc
tcctcagacagcagtgggaccaggatggaaacaacctttgggcctaccttttcgaccgtc
accaccatcaccaaagcagctgatgggactggcacatacaaacagcatcgcaggacacct
tcctcctctagcacccttgcctattcgccacgggatgaggaggacggcatgccccccatc
aacactcctcgccgctctgactcagccatctctgtccgctccctacactccgagtccagc
atgtccctgcgctccacgttctcgctgcctgaggaggaggaggagccggagccgttggta
tttgccgagcagccctcggtaaagctgtgctgccagctctgctgcagtgtgttcaaggac
cctgtgatcactacatgtgggcacaccttctgcagacgatgcgccttgaagtcagagaag
tgtcctgtggacaatgccaagctgacagtagtggtgaacaacattgcagtcgctgagcag
attggagagctcttcatccattgtcggcatggctgccacgcagcgggcactggaaagcct
ggggtctttgaggtagacccgaggggctgccccttcaccatcaagcttagtgcccggaag
gaccacgagagtagttgtgactacaggcctgtgcgctgccccaacaaccccagctgccca
ccccttctcaagatgaatctcgaggcccacctgaaagaatgcgagcacatcaagtgtcca
cactctaagtacgggtgcacatttattgggaatcaggacacctatgagacacacttagaa
acatgccgcttcgagggcctgaaggagttcctgcagcagaccgatgaccgcttccacgag
atgcatgtggcactggcccaaaaggaccaggagattgccttcctgcgttccatgctgggc
aaactctcagagaagattgaccagctagagaagagccttgagcttaagtttgatgtcctg
gatgagaaccagagcaagctcagcgaggacctcatggagttccggagggacgcgtccatg
ctgaacgatgagctgtctcacatcaatgcacggctgaacatgggtatccttggatcctat
gaccctcagcagatcttcaagtgcaaagggacctttgtgggacaccagggccctgtctgg
tgtctctgtgtctattccatgggtgacctgctcttcagtggctcttctgacaagacaatc
aaggtatgggacacgtgtaccacttacaagtgccaaaagacactggaaggtcatgatggt
attgtgctggcgctctgtatccaggggtgcaaactgtacagtgggtctgcagactgcacc
atcattgtgtgggacatccagaccctacagaaggtgaacactatccgggcccacgacaac
cctgtatgcacactggtgtcttcccacaacatgctcttcagtggctccctgaaagccatc
aaggtttgggacatcgtgggcactgagctaaagttgaagaaagaactcacaggcctcaac
cactgggtgcgggccctggtggcagcacagagctatctgtacagtggctcttaccagaca
atcaagatctgggacattcggacccttgactgcatccatgtcctgcagacatctggtggc
agtgtgtattccattgctgtgacgaatcaccacattgtctgtggcacctatgagaacctc
attcatgtgtgggacattgaatccaaagagcaggttcggaccctcacaggtcacgtgggc
acagtgtatgccctggcagtcatttcaacaccagaccagaccaaagtcttcagtgcatcc
tatgaccggtccctcagggtctggagtatggacaacatgatctgcacacagacgctgctg
cgccatcagggcagtgtaactgcactggctgtttcccggggccggctcttctcaggggct
gtggatagcaccgtgaaggtctggacatgctaa
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integrated database retrieval system
