Mus caroli (Ryukyu mouse): 110312535
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Entry
110312535 CDS
T05910
Symbol
Jmjd8
Name
(RefSeq) jmjC domain-containing protein 8 isoform X1
KO
K25792
jumonji domain-containing protein 8
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110312535 (Jmjd8)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
110312535 (Jmjd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_8
JmjC_2
JmjC
Cupin_1
Motif
Other DBs
NCBI-GeneID:
110312535
NCBI-ProteinID:
XP_021041863
Ensembl:
MGP_CAROLIEiJ_G0021254
UniProt:
A0A6P5R9Z9
LinkDB
All DBs
Position
17:21663282..21666287
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AA seq
328 aa
AA seq
DB search
MLCGCVCVQCACMKKEEIPKAGWLLFAGSYSSPDGKPMACGYASVDGIPSVLRACTRMFM
AAAGRRGLLLLFVLWMMVTVVLPASGEGGWKQNGLGIAAAVTEEERCTVERRAHITYSEF
MQHYAFLKPVILQGLTDNSKFRALCSRENLLASFGDNVVRLSTANTYSYQKVDLPFQEYV
EQLLQPQDPASLGNDTLYFFGDNNFTEWASLFQHYSPPPFRLLGTTPAYSFGIAGAGSGV
PFHWHGPGFSEVIYGRKRWFLYPPEKTPEFHPNKTTLAWLLEIYPSLALSARPLECTIQA
GEVLYFPDRWWHATLNLDTSVFISTFLG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtggatgtgtgtgtgtacaatgcgcgtgtatgaagaaggaggagattcccaag
gccggctggctactgtttgcaggtagctacagcagtccggacggtaagccaatggcttgt
ggttacgcaagtgtcgacggaattcccagcgtgctgcgcgcctgcacccgtatgttcatg
gcggcggctggacggcgcggtctgcttttgctctttgtattatggatgatggtgactgtg
gttctgcctgcctctggcgaagggggatggaaacagaatgggctgggaattgcagcagca
gtaacggaggaggagcgttgcactgtggagcgtcgggcacacatcacgtattccgaattc
atgcagcactatgccttcctcaagcccgtcatcttgcaaggactcacggacaactcgaag
ttcagggccctgtgttcccgggaaaacctgctagcctcgttcggggacaacgttgttcgc
ttgagtacagccaacacctactcctaccagaaagtggacctgcccttccaggaatatgtg
gaacagctgctgcagccccaggatcctgcatccctaggcaatgacaccctgtactttttt
ggagacaacaacttcactgagtgggcatccctcttccagcactactctccgccaccattc
cgtctcctgggaaccacccctgcttacagctttggaattgcaggagctggatctggggta
cccttccactggcatgggcctggtttctcagaggttatctatggtcggaagcgctggttc
ctctaccctcctgagaagacacctgagttccaccctaacaagaccacattggcctggctc
ctggaaatatacccatctctagccctgtcagcacggcctctagaatgtaccatccaggct
ggtgaagtactgtattttcctgatcggtggtggcatgccacactcaatctggacaccagt
gtcttcatctctaccttcctcggctag
DBGET
integrated database retrieval system
