Mus caroli (Ryukyu mouse): 110312570
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Entry
110312570 CDS
T05910
Symbol
Rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04068
FoxO signaling pathway
mcal05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
110312570 (Rag1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
110312570 (Rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110312570 (Rag1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110312570 (Rag1)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110312570 (Rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
110312570
NCBI-ProteinID:
XP_021041936
Ensembl:
MGP_CAROLIEiJ_G0024002
UniProt:
A0A6P7QN42
LinkDB
All DBs
Position
2:complement(94942181..94981272)
Genome browser
AA seq
1040 aa
AA seq
DB search
MAASLPSTLRLSSAPDEIQHPQIKFSEWKFKLFRVRSFEKAPEEAQKEKDSSEGKTYLEQ
SPVVPEKPGGQNSILTQRALKLHPKFSKKFHADGKSSDKAVHQARLRHFCRICGNRFKSD
GHSRRYPVHGPVDAKTQSLFRKKEKRVTSWPDLIARIFRIDVKADVDSIHPTEFCHDCWS
IMHRKFSSAHSQIYFPRNVTVEWHPHTQSCDICFTAHRGLKRKRHQPNVQLSKKLKTVLN
HARRDRRKRTQARVSSKEVLKKISNCSKIHLSTKLLVVDFPAHFVKSISCQICEHILADP
VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSILNSLMVKCPAQDC
NEEVSLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKIQVKEFAD
KEEGGDVKAVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLSCSQ
YHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSRTDVGIIDGLSG
LASSVDEYPVDTIAKRFRYDSALVSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKESCD
GMGDVSEKHGSGPAVPEKAVRFSFTVMRITIEHGSQNVKVFEEPKPNSELCCKPLCLMLA
DESDHETLTAILSPLIAEREAMKSSELTLEMGGIPRTFKFIFRGTGYDEKLVREVEGLEA
SGSVYICTLCDATRLEASQNLVFHSITRSHAENLQRYEVWRSNPYHESVEELRDRVKGVS
AKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKHPNASKEERKRWQATLDKHLRKR
MNLKPIMRMNGNFARKLMTQETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSCPAK
ECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEG
NESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKSSGFTMNSKE
TLGDPLGIEDSLESQDSMEF
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctctttgccgtctaccctgagactcagttctgcacccgatgaaattcagcac
ccacaaatcaaattttccgagtggaaatttaagctgtttagggtgagatcctttgaaaag
gcacccgaagaagcacaaaaggagaaggattcctcagaggggaaaacttatctagagcag
tctccagtagttccagagaagcctggcggtcagaactcaattctgacccaacgagcactg
aaactccatcctaaattttcaaagaaattccatgctgatgggaagtcaagcgacaaagca
gttcaccaagccaggcttagacacttctgccgcatctgtgggaatcgtttcaagagtgac
ggacacagccggagatacccagtccacgggcccgtggacgctaaaacccaaagccttttc
cgaaagaaggaaaaaagagtcacttcctggccagacctcattgccaggattttccggatc
gacgtgaaggcggatgttgactccatccacccgacagaattctgccatgactgttggagc
atcatgcacagaaagttcagcagtgcccacagtcagatctacttcccaaggaacgtgacc
gtggagtggcacccccacacacagtcctgtgacatctgtttcactgcccatcggggactc
aagaggaagagacatcagcccaatgtgcagctcagcaagaaactaaaaactgtgctcaac
cacgcgagacgagaccgtcgcaagagaactcaggctagggtcagcagcaaggaagtcctg
aagaagatctccaactgcagtaagattcatctcagtaccaagcttcttgtcgtggacttc
ccagcacactttgtgaaatccatctcctgccagatatgtgaacacattctggctgatccc
gtggagaccagctgcaagcacctattctgtaggatctgcattctcagatgcctcaaagtc
atgggcagctattgtccctcttgccgatatccgtgcttccctactgacctggagagtccg
gtgaagtcctttctgagcatcttgaattctctgatggtgaagtgtcccgcgcaagattgt
aatgaggaagtgagtctggaaaaatataaccaccacgtgtcaagccacaaagaatctaaa
gagactttggtgcatatcaataaagggggacggcctcgccagcatctcctgtcactgacg
agaagggcgcagaaacatcggctgagggagctcaagattcaagtcaaagaatttgctgac
aaagaagaaggcggagatgtgaaggctgtctgcttgactttgttcctcctggcactgagg
gcaaggaatgagcacaggcaagctgatgagttagaggccatcatgcaaggccggggctcc
gggcttcaaccagctgtttgcttggccatccgtgtcaataccttcctcagctgtagccaa
taccataagatgtacaggactgtgaaagctatcactgggaggcagatttttcaacctttg
catgctcttcggaatgcggagaaagtccttctgccaggctaccatccctttgagtggcag
cccccactgaagaatgtgtcctccagaactgatgttggaattattgatgggctatctgga
cttgcctcctctgtggatgagtacccagtagataccattgcgaagaggttccgctacgac
tctgctttggtgtctgctttgatggacatggaagaagatatcttggaaggcatgagatcc
caagatcttgatgactacctgaatggtcccttcacagtggtggtaaaggagtcttgcgat
ggaatgggggacgtgagtgagaagcatgggagcgggcccgcagttccagaaaaggccgtt
cgtttctctttcacagtcatgagaattacgatagaacatggttcgcagaacgtgaaggtg
tttgaggaacccaagcccaattctgaactgtgttgcaagccgttgtgtcttatgctggca
gatgagtctgaccatgagacccttactgctattctaagccccctcattgcggagagggag
gccatgaagagcagtgaattaacgctggagatgggaggcatccccagaacttttaaattc
atcttcaggggcactgggtacgatgaaaaacttgtccgggaagtagaaggcttggaagct
tctggctcagtctacatctgtacactctgtgacgccacccgtctggaagcctctcagaat
cttgtcttccactccataaccagaagccacgccgagaacctgcagcgctatgaggtctgg
cggtccaatccgtatcacgagtccgtggaagagctccgggaccgggtgaaaggggtctct
gccaaacctttcatcgagacagtcccttccatagatgcgcttcactgtgacattggcaat
gcagctgaattctataagattttccagctggagataggggaagtgtataaacatcccaat
gcctctaaagaggaaaggaagagatggcaggccaccctggacaaacatctccggaaaagg
atgaacttaaaaccaatcatgaggatgaatggcaactttgcccggaagcttatgacccaa
gagactgtagacgcagtttgtgagttaattccttctgaggagagacatgaagctctcagg
gagctcatggacctttacctgaagatgaaacccgtgtggcgctcttcatgtcccgctaaa
gagtgcccagagtccctctgtcagtacagtttcaactcacagcgtttcgcggaactcctc
tccaccaagttcaaatatagatacgagggcaaaatcaccaattactttcacaaaaccttg
gcacatgtccctgaaattattgaaagggatggctcgattggggcatgggcaagtgaggga
aatgaatcgggtaacaagctgtttagacgctttcggaaaatgaatgccaggcagtccaag
tgctacgagatggaagatgtcctgaaacatcactggctgtatacttcaaaatacctccag
aagtttatgaatgctcataacgcgttaaaaagctctgggtttaccatgaactcaaaggag
accttaggggaccctttgggcattgaggactctctggaaagccaagattcaatggagttt
taa
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integrated database retrieval system
