Mus caroli (Ryukyu mouse): 110312597
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Entry
110312597 CDS
T05910
Symbol
Wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110312597 (Wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcal03009
]
110312597 (Wdr43)
Ribosome biogenesis [BR:
mcal03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110312597 (Wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Utp12
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
EIF3I
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD40_like
UTP15_C
NBCH_WD40
Tricorn_2nd
Tricorn_N
DDHD
Adeno_52K
Motif
Other DBs
NCBI-GeneID:
110312597
NCBI-ProteinID:
XP_021041975
Ensembl:
MGP_CAROLIEiJ_G0021861
UniProt:
A0A6P5R9M3
LinkDB
All DBs
Position
17:67581949..67624427
Genome browser
AA seq
677 aa
AA seq
DB search
MAAGGGGSCDPLAPAGVPCAFSPDSQAYFALASSDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKESHQRKKRKSEVTGTKDQADLLALGTAVGSILLYSTVRGELHSKL
TSGGHENRVNCIQWHQDNDCLYSCSDDKYIVEWSTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLRFTTIRPNESQSSDGITGLYFLSGAV
HDRLLNVWQVRSENKEKSAVMSFTVTDEPVYVDLTLSENKEEPVKLAVVCRDGQVHLFEH
ILNGHCKKPLTSNCTIQIATPGKGKKVTPKPIPILAASFCLDKMSLLLVYGNWFQPTIER
VALNSKDTHICLERDISNCWAPTVETAITKVKTPVMNSEAKVLLPGVPGHHAPIKLPPAQ
PKEVENKRKLGSNEATIEERLGAMDLDRKGRKDDLQTNSFAVLLTQGLESNDFEILNKVL
QTKNVNLIKKTVLRIPLRVVIPLLQELTKRLQGHPNSAALMIQWLKCVLTIHASYLSTLP
DLVQQLGILYQLMESRVKTFQKLSNLHGKLILLITQVTASEKTKKGMSPGQKAKLVYEEE
SSEEESDDEIPEKDSDDNWDEDEDRDSEKDEGVDEDNEEEDEDMEDKEENEEDREVSSEK
ELNGDSDLDPENESEEE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggaggcggcggtagctgcgaccccttggccccggcgggggtcccctgcgcc
ttctcgccggacagtcaagcctacttcgctttagcctctagtgacggtcacctgcgagtg
tgggagaccgccaacaaccggctgcaccaggagtacgtgccttccgcgcacctcagcggt
acctgcacctgcctggcctgggcgccagcacggctgcaggccaaggaaagtcatcaaagg
aaaaaaaggaaatcagaagttacaggaacaaaggaccaggctgacctgttggctcttggc
acggcagttggtagcattttattgtatagtacagtaagaggagagttgcacagtaaatta
acaagtggtgggcatgaaaacagagtgaattgcatacagtggcatcaagataatgactgc
ttatatagttgttcagatgataagtatattgtggagtggagtacacagacatgcaaagta
aagtgcaaatggaaaggagacaatagcagcgtcagttccctgtgtatcagcccagatgga
aagatgttactttcagctggtcgaacaatcaaactatgggttttggagaccaaagaagtc
tacagacacttcacaggacatgcgacacctgtttcatcgcttaggttcacgaccatcaga
cctaatgagagccagtcttctgatgggattacaggcctttatttcttgtctggagcagta
cacgaccgattacttaatgtctggcaggtccggtcagagaacaaggagaagagcgcagtg
atgtcttttacagtcacagacgagcctgtctatgttgacttgactttgtcagaaaacaag
gaagagcctgtcaagttagctgttgtttgcagagatggtcaagttcatctttttgaacac
atattaaatggacattgcaaaaagcccttgacttcaaattgcacaatccagatcgcaaca
cctggaaagggcaagaaagtaacaccaaaacccatccctattctagcagctagcttttgc
ttagacaaaatgtccttattgctggtgtatggaaattggtttcagcctaccattgagcga
gtggctttgaactccaaagatactcatatatgtttggaaagagatatttcaaattgctgg
gctccaacagtagaaactgctataaccaaggtaaaaacaccagtaatgaactctgaagca
aaagttttgctgcctggggttcctggacatcatgcgccaatcaagctgccgcccgcccag
cccaaagaggtcgagaacaagaggaaattgggcagtaatgaggctaccatcgaggagcgc
cttggtgccatggatctggatagaaaaggaaggaaggacgaccttcagacaaacagcttt
gcagtcctccttacacagggcttagaaagcaatgattttgaaatattaaataaagtgctt
caaactaagaatgtaaacctaataaagaagactgtgctgaggatacccttgcgcgttgtc
atcccactgttgcaagagcttacaaagaggttacagggacatcccaatagtgctgcttta
atgattcagtggctgaagtgtgtgctgacgatccatgcatcatacctatccacgttgcct
gacctagtacagcagctgggaatactctaccagctgatggaaagcagagtcaaaactttc
cagaaactctcaaacctgcatggaaaactcattcttctcatcacacaagttacagcatca
gaaaaaacgaaaaaagggatgtctcccggacagaaggcaaaattggtgtatgaagaagag
tcttctgaggaggagtctgacgatgagatcccagagaaggattctgatgataattgggac
gaagatgaagacagagacagtgaaaaagatgagggcgttgatgaagacaatgaggaggaa
gatgaggacatggaagacaaagaagagaatgaggaggacagagaagtgtcaagtgaaaaa
gaattaaatggagattcggatttagatcctgaaaacgagagtgaagaagaatga
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