KEGG   Mus caroli (Ryukyu mouse): 110312597
Entry
110312597         CDS       T05910                                 
Symbol
Wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110312597 (Wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mcal03009]
    110312597 (Wdr43)
Ribosome biogenesis [BR:mcal03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    110312597 (Wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Utp12 Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_SPT8 Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th EIF3I Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_like UTP15_C NBCH_WD40 Tricorn_2nd Tricorn_N DDHD Adeno_52K
Other DBs
NCBI-GeneID: 110312597
NCBI-ProteinID: XP_021041975
Ensembl: MGP_CAROLIEiJ_G0021861
UniProt: A0A6P5R9M3
LinkDB
Position
17:67581949..67624427
AA seq 677 aa
MAAGGGGSCDPLAPAGVPCAFSPDSQAYFALASSDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKESHQRKKRKSEVTGTKDQADLLALGTAVGSILLYSTVRGELHSKL
TSGGHENRVNCIQWHQDNDCLYSCSDDKYIVEWSTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLRFTTIRPNESQSSDGITGLYFLSGAV
HDRLLNVWQVRSENKEKSAVMSFTVTDEPVYVDLTLSENKEEPVKLAVVCRDGQVHLFEH
ILNGHCKKPLTSNCTIQIATPGKGKKVTPKPIPILAASFCLDKMSLLLVYGNWFQPTIER
VALNSKDTHICLERDISNCWAPTVETAITKVKTPVMNSEAKVLLPGVPGHHAPIKLPPAQ
PKEVENKRKLGSNEATIEERLGAMDLDRKGRKDDLQTNSFAVLLTQGLESNDFEILNKVL
QTKNVNLIKKTVLRIPLRVVIPLLQELTKRLQGHPNSAALMIQWLKCVLTIHASYLSTLP
DLVQQLGILYQLMESRVKTFQKLSNLHGKLILLITQVTASEKTKKGMSPGQKAKLVYEEE
SSEEESDDEIPEKDSDDNWDEDEDRDSEKDEGVDEDNEEEDEDMEDKEENEEDREVSSEK
ELNGDSDLDPENESEEE
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggccggaggcggcggtagctgcgaccccttggccccggcgggggtcccctgcgcc
ttctcgccggacagtcaagcctacttcgctttagcctctagtgacggtcacctgcgagtg
tgggagaccgccaacaaccggctgcaccaggagtacgtgccttccgcgcacctcagcggt
acctgcacctgcctggcctgggcgccagcacggctgcaggccaaggaaagtcatcaaagg
aaaaaaaggaaatcagaagttacaggaacaaaggaccaggctgacctgttggctcttggc
acggcagttggtagcattttattgtatagtacagtaagaggagagttgcacagtaaatta
acaagtggtgggcatgaaaacagagtgaattgcatacagtggcatcaagataatgactgc
ttatatagttgttcagatgataagtatattgtggagtggagtacacagacatgcaaagta
aagtgcaaatggaaaggagacaatagcagcgtcagttccctgtgtatcagcccagatgga
aagatgttactttcagctggtcgaacaatcaaactatgggttttggagaccaaagaagtc
tacagacacttcacaggacatgcgacacctgtttcatcgcttaggttcacgaccatcaga
cctaatgagagccagtcttctgatgggattacaggcctttatttcttgtctggagcagta
cacgaccgattacttaatgtctggcaggtccggtcagagaacaaggagaagagcgcagtg
atgtcttttacagtcacagacgagcctgtctatgttgacttgactttgtcagaaaacaag
gaagagcctgtcaagttagctgttgtttgcagagatggtcaagttcatctttttgaacac
atattaaatggacattgcaaaaagcccttgacttcaaattgcacaatccagatcgcaaca
cctggaaagggcaagaaagtaacaccaaaacccatccctattctagcagctagcttttgc
ttagacaaaatgtccttattgctggtgtatggaaattggtttcagcctaccattgagcga
gtggctttgaactccaaagatactcatatatgtttggaaagagatatttcaaattgctgg
gctccaacagtagaaactgctataaccaaggtaaaaacaccagtaatgaactctgaagca
aaagttttgctgcctggggttcctggacatcatgcgccaatcaagctgccgcccgcccag
cccaaagaggtcgagaacaagaggaaattgggcagtaatgaggctaccatcgaggagcgc
cttggtgccatggatctggatagaaaaggaaggaaggacgaccttcagacaaacagcttt
gcagtcctccttacacagggcttagaaagcaatgattttgaaatattaaataaagtgctt
caaactaagaatgtaaacctaataaagaagactgtgctgaggatacccttgcgcgttgtc
atcccactgttgcaagagcttacaaagaggttacagggacatcccaatagtgctgcttta
atgattcagtggctgaagtgtgtgctgacgatccatgcatcatacctatccacgttgcct
gacctagtacagcagctgggaatactctaccagctgatggaaagcagagtcaaaactttc
cagaaactctcaaacctgcatggaaaactcattcttctcatcacacaagttacagcatca
gaaaaaacgaaaaaagggatgtctcccggacagaaggcaaaattggtgtatgaagaagag
tcttctgaggaggagtctgacgatgagatcccagagaaggattctgatgataattgggac
gaagatgaagacagagacagtgaaaaagatgagggcgttgatgaagacaatgaggaggaa
gatgaggacatggaagacaaagaagagaatgaggaggacagagaagtgtcaagtgaaaaa
gaattaaatggagattcggatttagatcctgaaaacgagagtgaagaagaatga

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