Mus caroli (Ryukyu mouse): 110312695
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Entry
110312695 CDS
T05910
Symbol
Psmb1
Name
(RefSeq) proteasome subunit beta type-1 isoform X2
KO
K02732
20S proteasome subunit beta 6 [EC:
3.4.25.1
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03050
Proteasome
mcal05010
Alzheimer disease
mcal05012
Parkinson disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05017
Spinocerebellar ataxia
mcal05020
Prion disease
mcal05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110312695 (Psmb1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110312695 (Psmb1)
05012 Parkinson disease
110312695 (Psmb1)
05014 Amyotrophic lateral sclerosis
110312695 (Psmb1)
05016 Huntington disease
110312695 (Psmb1)
05017 Spinocerebellar ataxia
110312695 (Psmb1)
05020 Prion disease
110312695 (Psmb1)
05022 Pathways of neurodegeneration - multiple diseases
110312695 (Psmb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110312695 (Psmb1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mcal03051
]
110312695 (Psmb1)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
110312695 (Psmb1)
Peptidases and inhibitors [BR:
mcal01002
]
Threonine peptidases
Family T1: proteasome family
110312695 (Psmb1)
Proteasome [BR:
mcal03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
110312695 (Psmb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Cytochrom_C1
FAM165
Motif
Other DBs
NCBI-GeneID:
110312695
NCBI-ProteinID:
XP_021042179
Ensembl:
MGP_CAROLIEiJ_G0021095
UniProt:
A0A6P5RD85
LinkDB
All DBs
Position
17:complement(11086301..11106117)
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AA seq
240 aa
AA seq
DB search
MLSTAAYRDGERVLGMGPHDSAGPVQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGF
SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLS
TILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV
GFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICVVTKEGIREETVPLRKD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgctttccactgccgcttaccgagacggggaacgagtgctgggaatggggcctcacgac
tctgccggccctgtgcagctgcgtttttcgccttatgccttcaacggaggtactgtattg
gcaattgctggagaggatttttccatcgtcgcttcagacactcggttgagtgaaggattt
tcaattcatacccgagatagccccaaatgctacaaactaacagacaaaacagtaattggc
tgcagtggttttcatggagattgtctcactttgacaaagattattgaagcaagattaaag
atgtacaagcattccaataacaaggccatgacaacgggggcgattgctgcaatgctgtct
accatcctgtactcacggcgcttcttcccttactatgtttacaacatcattggaggactt
gatgaagaaggaaagggagctgtgtacagctttgacccagtgggctcttaccagagagac
tctttcaaggcgggaggctcagcaagtgccatgctgcagccgctgctcgacaaccaggtt
ggtttcaaaaatatgcagaatgtggagcacgtccccctgacgctggacagagccatgagg
ctggtgaaagatgtcttcatttctgcagccgagagggatgtgtatactggagatgctctc
aggatctgcgtcgtgaccaaagagggcatcagggaggaaaccgttcccctgcggaaagac
tga
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