KEGG   Mus caroli (Ryukyu mouse): 110312705
Entry
110312705         CDS       T05910                                 
Symbol
Kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcal03036]
    110312705 (Kdm4b)
Enzymes [BR:mcal01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     110312705 (Kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     110312705 (Kdm4b)
Chromosome and associated proteins [BR:mcal03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    110312705 (Kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 LBR_tudor DUF7141 SLX1_C
Other DBs
NCBI-GeneID: 110312705
NCBI-ProteinID: XP_021042198
Ensembl: MGP_CAROLIEiJ_G0021776
UniProt: A0A6P5RAP1
LinkDB
Position
17:52912477..52990594
AA seq 1086 aa
MGSEDHSAQNPSCKIMTFRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYEQWKQGRDLTVLDHTRPTALSSPELSSWSA
SRTSIKAKLLRRQISVKESRPWRKAEEERRREPTRRPGPASHRRRSQPKKSKPEESRSPG
EAAAGVATLDEARGCSRGEAMPEDEEEEELVPSQGHEAEAVEEDGRGKPRPTKARNKKKT
PSPLSPPLLSAPPALFPTEEVLRPPPQPKSPGPAMGPMAAEGGPPPTPLNVVPPGAPVEE
AEVRPRPIIPMLYVLPRTSSTDGDREHSAHAQLAPMELGPEEEDQAQAGDSQGTTPFSKL
KVEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFLFSGEDDVSDPEALRSLLSLQWKNK
AASFQAERKFNAAAALSEPYCAICTLFYPYSQSVQTERDSGVQPPSKSGQRTRPLIPEMC
FTSSGENTEPLPANSYVGEDGTSPLISCAHCCLQVHASCYGVRPELAKEGWTCSRCAAHA
WTAECCLCNLRGGALQRTTEHRWIHVICAIAVPEVRFLNVIERNPVDVSAIPEQRWKLKC
VYCRKRMKRVSGACIQCSYEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCLKHRASGAG
GQLLRTVSLGQIVITKNRNGLYYRCRVIGTTAQTFYEVNFDDGSYSDNLYPESITSRDCL
RLGPPSEGELVELRWTDGNLYRARFISMATSLIYQVEFEDGSQLTVKRGDIFTLEEELPK
RVRSRLSLSTGTPQEPGFSGDDVKAAKRPRVASVLATTTEDTGHSPEYLSFMESLLQAQG
RPGAPF
NT seq 3261 nt   +upstreamnt  +downstreamnt
atggggtccgaggaccacagcgcccagaaccccagttgtaagatcatgaccttccgcccc
accatggatgaattcagggacttcaacagatatgtggcgtacattgagtcacagggtgcc
caccgtgctggcctggccaagatcattccacccaaagagtggaagccacggcagacgtat
gatgacatcgacgatgtggtcatcccagcgcctattcagcaggtggtgacgggccagtcg
gggcttttcacgcagtacaacatccagaagaaggccatgaccgtgggggagtaccgccgc
ctagccaatagtgagaagtactgtaccccacgccatcaggacttcgatgacttggagcgc
aagtactggaagaacctgacctttgtctcacccatctatggagctgacatcagtggctcc
ctgtacgacgatgacgtggctcagtggaacatcggcaatctgaggaccatcctagacatg
gtggagcgcgaatgcgggaccatcattgagggcgtgaatacaccctacttgtactttggc
atgtggaagaccacgtttgcctggcacacagaggacatggacctctacagcatcaactac
ctgcacttcggagagcctaagtcctggtacgccataccaccggagcacggcaagcgcctg
gagcgcctggccataggcttcttccctgggagctcacagggctgtgatgccttcctaagg
cataagatgacgctcatctcgcccatcatcctgaagaagtatggcatccccttcagccgg
attacacaggaagctggggagttcatgatcacgttcccctatggttaccatgcgggcttc
aaccatggctttaactgcgctgagtccactaacttcgccacactgcgttggatcgactat
ggcaaagtggccacgcagtgtacatgtcgaaaggacatggtcaagatctccatggacgtg
tttgtacgcatcctgcagcccgaacgctatgagcaatggaagcaaggccgtgacctcaca
gtgctggaccacacgaggcccacagccctgagcagtcctgagctcagctcctggagtgcc
tcgcgcacctccatcaaggccaagctcctgcgcagacaaattagtgtgaaggagagcaga
ccctggagaaaggctgaggaggagaggaggcgggagccgaccaggaggccagggccggcg
tcacaccggagacggagccagcccaagaagtcaaaacctgaagagtccaggtctccaggg
gaagccgcggctggggtagctactctggatgaggccagaggctgttcccgaggagaggcc
atgcctgaggacgaggaggaggaagagctggtaccttcacagggccacgaggcagaggct
gtggaagaggatggcagaggcaagcctcggcctactaaggccagaaataagaagaagact
cccagcccgctgtcacccccattgctgtctgccccaccagccctattccccactgaggag
gtcctgaggccaccaccccaacccaagtctccagggccagctatgggccccatggctgca
gaggggggtcctccaccaacacccctcaatgtcgtgcctcctggggcgccagttgaggaa
gcagaggtgcggccacggcccattatcccaatgctgtacgtgctaccccgcaccagcagc
accgatggggacagggagcactctgcccacgcacagttggcacctatggagctggggcca
gaagaggaagaccaggcccaggctggtgactcacagggaacaacccctttctctaagctg
aaggtggagatcaagaagagccggcgtcaccccttgggtcggccacccactcgatccccg
ctgtctgtggtcaagcaggaggcctcaagtgatgaagaagccttcctgttctcaggagag
gatgatgtcagtgaccctgaggccttgagatcgctgctgtccctgcagtggaagaacaag
gcggctagcttccaagccgagaggaagttcaacgcagcagccgccctcagtgagccctac
tgtgccatctgtactctcttctacccctacagccagtcagtacagacagagcgggacagt
ggtgtccagcctccctccaaaagtggccagaggacacggccattgatccctgagatgtgc
ttcacttcaagtggggagaacacagagccgctgcctgccaactcctacgtcggtgaggac
ggcaccagcccgctcatctcctgcgcccactgctgcctgcaggtccatgccagttgctat
ggtgtccggcctgagctggccaaagagggctggacatgttcccggtgtgcggcccacgct
tggactgcggaatgctgtttgtgcaacctgcgggggggagctctacagaggaccacagag
cacaggtggattcacgtgatctgcgccattgcagtccccgaggtacgattcctcaatgtg
attgaacgcaacccagtggacgtcagtgccatccctgagcagcgatggaaactgaaatgc
gtttactgccgcaagcgtatgaagagggtgtcgggtgcctgcatccagtgctcctatgag
cactgctccacatccttccatgtgacctgtgcgcatgctgctggtgtcctcatggaaccg
gatgactggccctatgtggtgtccatcacctgcctcaagcaccgggccagcggagcaggg
ggccagctcctgcgcacggtgtccctgggccagattgtcatcaccaagaaccgcaacggg
ctctactatcgctgccgggtcattggcaccactgcgcagacattctacgaggtcaacttt
gacgatggctcctacagtgacaacctgtacccagagagcatcacgagcagagactgccta
cggctagggccaccctctgagggcgagctggtggagctgcggtggacagacggtaatctg
tacagagccaggtttatctccatggccaccagcctcatctaccaggtagagtttgaggat
gggtctcagctgactgtgaagcgtggggacatcttcacactggaagaggaactgcccaag
agggtgcgttcccggctgtcactgagcactggcacaccacaggagcccggcttctctgga
gatgatgtgaaggctgccaagcgcccacgggtggcctcagtgctggccaccaccactgag
gacacagggcatagcccagaatacctgtccttcatggagagcctgctgcaggcacagggc
cggcctggagcacccttctag

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