Methylacidiphilum caldifontis: IT6_00015
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Entry
IT6_00015 CDS
T09436
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
mcao
Methylacidiphilum caldifontis
Pathway
mcao01501
beta-Lactam resistance
mcao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IT6_00015
01503 Cationic antimicrobial peptide (CAMP) resistance
IT6_00015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcao02000
]
IT6_00015
01504 Antimicrobial resistance genes [BR:
mcao01504
]
IT6_00015
Transporters [BR:
mcao02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IT6_00015
Antimicrobial resistance genes [BR:
mcao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IT6_00015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
CnrY
Motif
Other DBs
NCBI-ProteinID:
QSR88740
LinkDB
All DBs
Position
913..4122
Genome browser
AA seq
1069 aa
AA seq
DB search
MTLSDLSIRRPVFAWMLMIGLIFFGAVSLGRLGISQLPEVDFPIITINLQWNGASPEILE
TELVDPIEQAVISAQGLKGLSSYIQLGQASVILEFELGRNIDSALTEVQSKISSVKLPMD
PTQQVGMQQVPTPVPQPILVKDNPEEQPILLIGVWGEAKSLHDLVTFVDLVLHDELQIVP
GVGQIVLAGYNLRNLRIWVDGQKLATYQLTVQDIQTAIMQEHVEVAAGDLENARYQFNVR
AMGEGLSPKEVGNIQIKKRGSELIYRSNIRIKDVARVEDGLDDIRRIASTNGKTAIGVGI
KKQPGANSVEVARLVKKKLQQLQPFLPKGIHTEVVYDRTKHIEDSIQETLFTLLLSAVIT
SIVCYLFLGSWTATLNVLFSIPTSVLGTFIVIYFLGFTLNFFTLLGLSLAIGIIVDDAIM
VLENIYRHRDMGKSRIIAARDGAREITFAAIAATVAIIAIFLPVAFMKGVIGKYFYQFGL
TISAAVALSLLEAITLTPMRCSQIMDDGKKRIGLAFLVDYAFKSLSKIYKYLLKFSISYS
WIVIFIACGLFLFSLKLFSFLPQELIPTQDESSFIIRIQTPVGSSIYYTEEKLKECEKRI
LSHKEVDKVFGAVGGMIQRTGATDGNLVDSEVNVGTIYVTLKNRKERVISQKLFMDRIRD
ELNAMGDLRATPQDLSIRGFATGRGFPIELTIRGEDYKVLQKIAQQDIEEMKKSGYFVDL
DTDFRDGMPEVRVYPDRFAANACSIPIQNIANTVAIAIGGIAQGQFTNGERRYDIRIRLQ
GKERVGPEDIARLGVRTNTNEFMPITAVAKLQTVKTYQTLTRKMRERAITIFSNVSSTKS
QAEALAVAKKICSKNLPKGYRLYLSGGAASFEETFQSLVFALWVGVVIAYMVLASQFNSF
VHPFSVLLALPFSLSGALLALWFTHQSINLYSMIGLILLMGIAKKNSILLVEFTNQLRNK
GLPIKEAILEAAPIRLRPILMTSMATIAAAIPPAFALGPGAESRIPMAITLLGGIVVSTL
FTLFVVPSSYLLLSRFEKPSQLKTPPQDLVEKGEEVLVEKNGNITRPLL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgaccctttcagatctctctattcgcaggccagtgtttgcatggatgctgatgataggg
ttgatattttttggggctgtctctttgggccgattagggataagtcagctaccagaagtc
gattttcccatcattacgattaatcttcaatggaacggggcttctccagaaattcttgaa
actgaattggttgatcctatcgaacaagcggtcatatctgctcagggactcaaagggcta
agttcttacattcaattaggacaggcttctgttatattggagtttgaattaggcagaaat
atcgattcagcactaaccgaggtgcaatcgaagatcagctcggtcaagcttcccatggat
cctactcaacaagtaggcatgcaacaagtacctactcctgttccacaacctatccttgtc
aaggataatcccgaagaacagcccattcttttaatcggtgtttggggagaagctaaatcg
cttcatgatttggtcacttttgtagatcttgttctccatgatgaactgcagattgttcca
ggggtaggtcaaattgtattggccgggtataacctaagaaatttaagaatatgggtggat
gggcaaaagttagccacttatcaattgaccgttcaggatatccagacagctattatgcag
gagcatgtagaagtggctgcgggggatctcgaaaacgcccgatatcaatttaatgtaagg
gcaatgggtgaggggttaagccctaaagaagtaggcaatatacaaattaagaaaagaggc
tcagagttaatttacagatcaaacattcgaatcaaggatgtagccagagtcgaagacggg
ttagacgatatcagaagaatcgcttcaacgaatgggaaaaccgctataggcgttggaata
aaaaagcagcctggagctaactctgttgaggttgcccggttagttaaaaagaagctacaa
caacttcaacctttccttcccaaagggattcacaccgaagtcgtctacgacagaaccaag
catattgaagattcgatacaggaaactctttttactcttttgctctcagctgtaataaca
agcattgtttgttatctttttctaggaagttggaccgctacccttaacgttcttttttca
attccgacatccgtcctgggaacgtttatcgtcatctattttttaggttttactttaaat
tttttcacccttttgggcctgtcccttgccattgggatcattgttgatgacgcgatcatg
gttcttgaaaatatctaccggcatcgggacatggggaaaagcaggatcattgctgcaaga
gatggagctagagaaattacttttgcagcgattgctgcaactgtagctataatcgctatt
tttctccctgttgcgtttatgaagggagtgataggaaaatatttttatcagtttggtctt
acgatttctgcagctgtggcactttctctactcgaagcgattacattgactcccatgcgc
tgctctcagatcatggatgatggcaaaaaaagaatcgggttagcttttcttgtagattat
gccttcaaaagcttatctaagatttataaatatcttttaaagttttctatttcctattct
tggattgtgatctttattgcttgcggcctttttcttttttctctcaaactttttagtttt
ttaccccaagaattgatcccaactcaagatgagtcctctttcatcattaggatccaaacc
ccggtgggttcttcaatctattacaccgaagaaaaactgaaggaatgtgaaaagcggata
ctttcacataaagaagtcgataaagtgtttggtgcagtgggaggaatgattcaaaggaca
ggcgctacggatgggaatcttgtcgacagtgaagttaatgtaggcaccatctatgtaact
cttaaaaatagaaaagaaagagttatttctcaaaaacttttcatggacaggataagggat
gagttaaacgcaatgggtgatctgcgggcaactcctcaagatctttccattcgtggattt
gctacgggaagaggctttcctatcgaactgactattcgaggtgaagattacaaggttctt
caaaagattgcccaacaagatatagaagaaatgaaaaagagtggttatttcgttgacctg
gataccgattttagagatggaatgcccgaagtgagagtttatcctgatcgatttgctgct
aatgcctgttcaattcctatacaaaacatagctaacacggtggccatcgctattggaggc
attgcccagggacaattcaccaatggagaaaggcgctatgatattcggatcaggctccaa
ggaaaagaaagggtaggtccagaagatattgcccggttaggggtaagaaccaatacgaac
gaatttatgcccataaccgctgtggccaagcttcagaccgttaaaacttatcagaccttg
acacggaagatgagagaaagagcaatcactattttttctaacgtttcttcaactaagtcc
caggctgaagccctggccgtagctaaaaagatatgcagtaagaatctccccaagggttac
cgactttacctgagtggaggtgcagcttcttttgaagaaacgttccagagtcttgtcttt
gctctttgggtaggagtcgttattgcttacatggttttagcttctcaatttaatagtttt
gtccatcctttttctgttcttctggcactgccctttagtttaagtggggctctattggcc
ctgtggtttacgcatcaatcgattaatctttatagcatgattgggcttatccttttaatg
ggtatagccaagaaaaattcaattcttttggttgagtttacaaaccagctcagaaataaa
ggactacccattaaagaggcaatacttgaagctgcacccattcgacttcgacctatttta
atgacctcaatggcaacgattgctgccgccatcccacctgcttttgcgttaggcccaggc
gcagagagccgtattccgatggcgatcactcttttaggaggaattgtcgtctctacatta
tttaccctttttgtggttccttcgtcttatcttttgctctctcgttttgaaaagccatct
caactaaagactcctccacaggatcttgtggagaaaggagaagaagttttggtggagaaa
aatggaaacataacacggcctctattgtaa
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