Methylacidiphilum caldifontis: IT6_07395
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Entry
IT6_07395 CDS
T09436
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
mcao
Methylacidiphilum caldifontis
Pathway
mcao01501
beta-Lactam resistance
mcao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IT6_07395
01503 Cationic antimicrobial peptide (CAMP) resistance
IT6_07395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcao03036
]
IT6_07395
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcao02000
]
IT6_07395
01504 Antimicrobial resistance genes [BR:
mcao01504
]
IT6_07395
Chromosome and associated proteins [BR:
mcao03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IT6_07395
Transporters [BR:
mcao02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IT6_07395
Antimicrobial resistance genes [BR:
mcao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IT6_07395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
PBP_N
Castor_Poll_mid
Motif
Other DBs
NCBI-ProteinID:
QSR88207
LinkDB
All DBs
Position
1592209..1593630
Genome browser
AA seq
473 aa
AA seq
DB search
MSNKELKVGSKIKTIKNGIWARLHRILERNKSGNTRGGMNSRREMKEISSSTISPPPPIE
PPPIKPKEKFKQILKKIKKGPAFIALSFGAILLALLLIGLIPRIHNQLVLKRFVAIANEI
PVSVIKPKLAPPVTDLRLPGTARGYFETPIWARVNGYIKNWWVDIGDEVKEGQLMAVIDA
PDIDRQVVEMEGVLKSAEANLEIARISLDRWKELIKTRAVSQQQLDERQAAYDAALARVN
ASRGQYEHWKELQNFEKIYAPFSGIVTARNIDIGTLVSLGSDKGVRELYRISVTDVMRVY
VAVPQNYAPQIQLGTWADITASEFPGKIFKGLVVRTAKAVDPLSRTLLTEVDVGNPKGEI
IVNMYVDVTFHLPRNQETFLVPVNAVIDRADGNYVLTVDENNIVHYNKVELGKDLGQYIE
IPFGLSKDQKIVLNPPEILEEGSKVVVVADLSQPKPDKKREKQLLQKGKLAHE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaggagttaaaggtgggttcgaaaataaaaactataaaaaatggaatatgg
gctagattgcaccgcattcttgaaaggaacaaaagcgggaacacgaggggcggtatgaat
agccgaagggaaatgaaagagatctcctcttctacaatttctcctcctccacccattgaa
cctccacctattaaaccaaaagaaaagtttaaacaaatcttaaagaaaataaaaaaggga
ccagcttttattgctttatcttttggagctattcttttggcccttttgcttattgggctt
attcccaggatacataatcagcttgttcttaagaggtttgtcgcaatagccaatgaaatt
cctgtatcggttataaagccaaaattggccccgcctgtgaccgatttgaggcttccagga
acagctagaggctactttgaaacgcctatatgggctagagtcaacggatatataaaaaat
tggtgggtagatattggtgatgaagtaaaagagggacaactcatggctgtcattgatgca
ccagatattgatcgacaagtcgtagaaatggaaggtgtgctcaaatctgccgaagctaac
ctagaaattgctcggatatcgctcgatagatggaaagaactgataaaaactcgcgctgta
tctcaacaacaacttgatgaaagacaagcggcttatgatgcagctcttgcacgagtcaat
gcttcaagaggtcaatatgagcattggaaagaactccaaaattttgaaaaaatatatgct
cctttcagcggtattgtaacagcgagaaatattgatataggaacgctcgtttcgttggga
agtgataaaggagttagagagctttatcgaatttcagtcactgatgtgatgagagtctat
gtagccgtacctcagaattatgctccacaaattcaacttggaacatgggcagatataacg
gcctctgaatttcctggaaaaatctttaaaggattagtggtaaggacagccaaagcggta
gaccccctgtcccgaacgctgttaactgaagtggatgtaggcaaccctaagggagaaatt
atcgttaatatgtatgtggatgttacctttcatttacctagaaatcaagaaactttcttg
gtacctgtgaatgctgtaattgatagggcagatggcaattatgttcttactgttgatgag
aataatatagttcattataacaaggttgagttaggcaaagatttaggtcaatatattgaa
atacctttcggtctttctaaagatcaaaaaattgtgttaaatccacctgaaattcttgaa
gaaggaagtaaagtagttgttgtagctgacctttctcagcccaagccagataaaaaaagg
gaaaaacaacttttacaaaaaggcaagcttgcacatgaatga
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