Methylacidiphilum caldifontis: IT6_08170
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Entry
IT6_08170 CDS
T09436
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mcao
Methylacidiphilum caldifontis
Pathway
mcao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IT6_08170 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcao03400
]
IT6_08170 (nth)
Enzymes [BR:
mcao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IT6_08170 (nth)
DNA repair and recombination proteins [BR:
mcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IT6_08170 (nth)
Prokaryotic type
IT6_08170 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
DUF3349
EndIII_4Fe-2S
RecR_HhH
Prok-E2_E
MLLE_2
TPR_AP5Z1
SPO22
Motif
Other DBs
NCBI-ProteinID:
QSR88346
LinkDB
All DBs
Position
complement(1761357..1762055)
Genome browser
AA seq
232 aa
AA seq
DB search
MKKNQLRSKDTVSLANSQINLNEKERIEKILAILKNTYPDSKPALLYTNPLELLIATILS
ARCTDEQVNLVTKKLFHKYRTAEDYASAPIEELEEMIHSLGFYKTKAKNIKNACSLICSK
FNGKVPSQMNMLVELPGVGRKTANVVLGNAFGINEGVVVDTHVSRVAFRLGLTKEKQPEK
IEVDLMRCIPKEQWAEFSNQLIWHGRKRCKARNPDCPHCELNPICPKIGVSQ
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaaaccagctacgttcaaaggacactgtttctttagctaatagccaaatcaat
ttgaatgaaaaagaaagaatagaaaaaattctggctattctaaaaaatacatatcctgac
tcaaaacctgctcttttatatacaaaccccttagagttacttattgccaccattctttct
gcacgatgtaccgatgaacaggttaatctggtcaccaagaagctgtttcataaatatcga
acagctgaagattacgcttctgctcctatagaagaattagaggagatgatccatagcctt
ggattctataaaacgaaagcaaaaaatattaagaatgcttgtagccttatttgttcaaaa
tttaatggcaaagtcccttcccaaatgaatatgcttgtcgaattacctggggtaggtcgg
aaaaccgctaatgtggttctaggcaatgcctttggaataaacgagggcgttgtggtagat
acccatgttagccgagtggctttcaggttgggattgacaaaagaaaaacaaccagaaaag
atagaggttgacttgatgcgctgtatccctaaagaacaatgggctgaatttagtaatcag
ctgatctggcacggaagaaaaagatgtaaagctagaaatcccgattgccctcattgcgaa
cttaaccccatctgtcccaaaataggagtaagtcaataa
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