Moraxella catarrhalis 25239: MC25239_01632
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Entry
MC25239_01632 CDS
T03381
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mcat
Moraxella catarrhalis 25239
Pathway
mcat03030
DNA replication
mcat03410
Base excision repair
mcat03420
Nucleotide excision repair
mcat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MC25239_01632 (ligA)
03410 Base excision repair
MC25239_01632 (ligA)
03420 Nucleotide excision repair
MC25239_01632 (ligA)
03430 Mismatch repair
MC25239_01632 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcat03032
]
MC25239_01632 (ligA)
03400 DNA repair and recombination proteins [BR:
mcat03400
]
MC25239_01632 (ligA)
Enzymes [BR:
mcat01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MC25239_01632 (ligA)
DNA replication proteins [BR:
mcat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MC25239_01632 (ligA)
DNA repair and recombination proteins [BR:
mcat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MC25239_01632 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MC25239_01632 (ligA)
MMR (mismatch excision repair)
DNA ligase
MC25239_01632 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MC25239_01632 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
Nlig-Ia
PTCB-BRCT
5_3_exonuc
Ribophorin_II_3rd
Motif
Other DBs
NCBI-ProteinID:
AIT44009
LinkDB
All DBs
Position
complement(1757439..1759514)
Genome browser
AA seq
691 aa
AA seq
DB search
MNTQTSFFNDTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRT
LMMLEQQHPNLIQPDSPINTVGGELLPFFTQVAHEVPMLSLGNVFNADDLSGFLRRANER
LGIAIDEYEMELKLDGLAVSLKYQNGQFAQAVTRGDGQVGEDITHNVRTIRNLPLTLTGC
EQIKQLEIRGEVLMPKAGFEKLNRESIAQGIKTFANPRNAAAGSLRQLNAAIAAARPLAF
FGYSVNDGLPDGITTQSGAMQWLGQLGFEIAPFKVAKSLDEIQAFYAHVIKTRSQLPFEI
DGLVIKVNDLNLQARLGFLSREPRWATAYKFPAETVPTRLIDVEWQVGRTGTLTPVGRLE
PITVGGVTVSNVTLHNFGEIERLGVMVGDVVNVHRAGDVIPKVSGVIGELRPTDAKPILL
PTVCPVCQSPISLPEGEALARCTGGLYCAAQQQEALIHFVSRRAMDIDGLGSQWLIKFFE
MGLVQTVADIYKLHTQAEYLITLEGMGDKSVTKMLSAIEKSKQTTLPRFIFALGIRGVGE
STALSLAQQFGELQSIIEADLQALQAVPDIGEITAQSIYDFFRASHNIEVVQALIEAGVS
WQAMDTPDKSSLPLTGETWVVTGTLGSMGRDEAKDKLIALGAKVAGSVSAKTTRLLAGEK
AGSKLEKAQKLGVTVVLEDEFLALIALYNQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccaaacttctttttttaatgatacctctaaaaataatcctagtaaagccaat
gatcaaattatcgctcaaatgcgtgccttaattaagctgctaaagcgtcacaatcatgcg
tattatgtgatggatgcaccaacgatttcagatgatgaatatgatggtctgcgtcgcaca
ttaatgatgcttgagcagcagcatcccaatttgatacaacctgatagcccgattaatacg
gtcggtggtgagctgctgcctttttttacacaagtggctcatgaagtgccgatgctatca
ctgggcaatgtatttaatgctgatgatttgtcagggtttttgcgtcgtgccaatgagcga
ttgggtatcgccattgatgagtatgaaatggaactaaaacttgatggcttggcggtatca
ttaaagtatcaaaatggtcaattcgcccaagctgtcactcgaggcgatgggcaggtgggc
gaggatatcacgcataatgtcagaaccattcgtaatttaccactgactttgacaggatgt
gagcaaatcaaacagcttgagattcgaggtgaggtgttgatgcccaaagcaggttttgaa
aaattaaatcgtgaaagcatcgcacaagggatcaagacttttgccaatcctcgcaatgct
gctgcaggttcgctaaggcagttaaatgctgccatcgccgccgcgcgtccgttggcattt
tttggatactcagtgaatgatggattgcctgatggtatcaccacgcagtcaggtgcaatg
cagtggcttggtcagcttgggtttgagatagcaccttttaaggttgccaagagtcttgat
gagattcaagcattttatgcccatgtcatcaaaactcgtagccagctaccgtttgaaatc
gatggtttggtgattaaggtgaatgatctaaatttacaggcacggttagggttcttaagc
cgtgaaccacgctgggcaacagcttacaaatttcccgccgaaactgtgcccacacgactc
atagatgtagagtggcaagtagggcgtacagggactttgacacctgtgggcagacttgag
ccgataactgtgggcggtgttacggtcagtaatgtgactttgcataattttggtgagatt
gagcgtcttggggtgatggttggagatgtggtcaatgtgcatcgagcaggtgatgtcatt
cctaaggtatctggcgttattggtgagctacgccctaccgatgccaaacctatcctcctg
ccaacggtttgcccagtttgtcaatcaccgattagcttaccagaaggtgaggcgttggca
agatgtactggtgggctatactgtgccgcacagcagcaagaagcattgattcattttgtc
tctcgccgtgccatggatattgatggtttgggcagtcagtggctgattaagttttttgaa
atggggcttgttcagacggtggcagatatttacaaactccacacgcaggctgagtattta
ataacgctagagggtatgggtgataaatcagtcaccaaaatgctatcggctattgaaaaa
tcaaaacagaccaccttacctcgttttatttttgctttggggattcgtggtgttggcgaa
agtacagcattgtcattggcgcagcagtttggggaattacagtcgatcattgaggcagat
ttacaagcactacaagctgtacctgatattggtgagataactgcccaatcaatttatgat
ttttttcgggcatcgcataatattgaggttgtgcaggcactgattgaggctggtgtttct
tggcaagcaatggatacgcctgacaaatcatcattgccattgactggagagacttgggtg
gtgactggtactttaggcagtatggggcgtgatgaagccaaagataagctcattgccttg
ggtgcaaaagttgctggtagtgtttcagcaaagaccacacggctacttgctggtgaaaaa
gcaggtagtaagcttgaaaaagcccaaaaacttggcgttacagtcgttttagaagatgaa
tttttggcactgattgctttatataatcaggtataa
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