Montipora capricornis (leaf plate montipora): 138031318
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Entry
138031318 CDS
T10557
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
138031318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcaz03400
]
138031318
Enzymes [BR:
mcaz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
138031318
DNA repair and recombination proteins [BR:
mcaz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
138031318
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT_2
BRCT
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
138031318
NCBI-ProteinID:
XP_068735127
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All DBs
Position
14:15885284..15935778
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AA seq
919 aa
AA seq
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MEGDSNAGVAAQVPFYDLCCLLEKISETSGTEKKKKILSTFVSSWREAHGKLHKDTSKTT
DSFYSAMRLLLPQLDKERGAYGIKEVVLAKYYIDILSIGKDSVDGRKLLNYRAPKNAKQD
SVADFASVAYFVLKNRCPEKGSLKIAQVNKHLDDVAQANVERKREDVKKALQFLLRNTSA
LEQKWLIRIIFKELKVGLSENSVFNVFHPDAVELYSVCNSLSKVCTDLHDPTIRMNEAQM
SLFSPFRPMLAERGAIEEVEKIMKNQAFYIETKIDGERMQLHKEKDVFMYFSRSANDHTH
TFGANPSSGVLTPHIAGCFSSSVHSCILDGEMIVVDPATDVWLSKGMNMDVKSLTTYENG
YHPCFVVFDILVINDKKLANVPLCERIKTMEKVLRPRPGYFQFVERQDASSRGDVVKALN
EAIDKREEGLVIKSPSSIYKPNVRSGSGWIKIKPEYVDSLSDEMDLLIVGGYFGVGRRSG
MISHFMCAVAVPSGIPGQHPSVFHSFCKVGTGYTMNELNELHQLLHPYWRPFDTKKPPDS
VILASGYKEKPDVWIEPTKSKIVQVKAAEIIASDKFKTGFTLRFPRVEAIRKDKMWYECL
SLKELEKLKSMAEGKLTYQHTHSEHSSEPARKRRREALRVEHVTSVAEHFKPADLSSVKQ
VSQMFEGREFYIVNGPSTHTKAILEKKVAENGGTFTQNPSPDTYCVIAGRINVRVKNIIS
QKQYDVVQASWLIKCLENGQVDPWQPSDMLHCSPGTADKFAEEYDRFGDSYTQDATVESL
KEVFNNVQNQNASVPLSRDDLLDVMEHYFPDNSPMSLFKHCRVYVDLYTGIGDSSTRIPN
SNLELVGLQVRLYGAQITDTLDNRVTHIILDESDLTRFEQLQRADERSSKQRHFVTQDWV
TQSVQERKLLTERHFRPST
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggagggagattccaacgctggagtcgcagctcaggttccgttttatgatttatgttgc
ttgttggaaaaaatttcggaaacttcaggtactgagaagaaaaagaagattttgtcaaca
ttcgtgagttcttggagagaggcgcatggcaagcttcacaaggatacttcgaaaacaact
gattcgttttactctgcaatgcgactcctgttaccacaactggacaaagaaagaggagcg
tatggaataaaggaggttgtactggcaaaatattacattgatattctaagcattggtaag
gatagtgtggatgggcggaaactgttgaattacagagctcccaaaaatgctaaacaggat
tcagttgctgattttgcaagtgtcgcctactttgttttgaaaaacagatgtccagagaag
ggaagtttaaaaattgctcaagttaacaagcatcttgatgatgtggcacaagcaaatgtt
gaacgcaaacgtgaagatgtcaagaaagccttacagtttcttctacgaaacacaagtgcc
cttgagcagaagtggttaatcaggattatcttcaaggaactgaaggttggccttagtgag
aattctgtgttcaatgttttccatcctgatgctgtggagctctatagtgtttgtaacagt
ttgtccaaggtgtgcactgatcttcatgaccctacaatcagaatgaatgaagcacagatg
tctttattctcaccattcagaccaatgttagcagaacgaggagctattgaagaggtagaa
aagatcatgaagaatcaagcattttacatagaaacaaaaatagatggagaaaggatgcaa
ctccacaaagaaaaagatgtctttatgtacttttctagaagtgcaaatgatcacacccac
acatttggcgcaaatccgtcttcaggagttctcacaccacatattgctggctgtttctca
agctcagtgcattcctgtatattggatggtgaaatgattgtggttgatcctgcaacagat
gtttggctatcaaaagggatgaacatggatgtaaagtctttaactacttatgaaaatggc
taccatccttgtttcgtcgtgtttgatatccttgttatcaatgacaagaaacttgccaat
gtgcccctttgtgaaagaatcaaaaccatggaaaaagtactgcgaccaaggcctggatat
tttcagtttgtcgaaaggcaggatgcatcatcgagaggagacgttgtaaaagctctaaat
gaggcaatcgataaaagagaagagggattggtcatcaaatcgccatcctcgatttataaa
ccgaacgtgagaagtggaagtggctggataaaaatcaagcctgaatatgttgatagtttg
agtgatgagatggatctcttaatcgttgggggctatttcggagttggtcgtcgcagtgga
atgatatctcattttatgtgtgccgtggcagtgccatctggtatcccagggcaacatcct
tcagtgtttcactcattttgcaaggttggaaccggttacacaatgaatgagttgaacgaa
ctacatcaattattacatccctattggcggccatttgatactaaaaagcctcctgattca
gttattttagcttccggttacaaagaaaaaccagatgtttggatcgagccaaccaaatca
aaaattgtgcaggttaaggctgcagaaattatcgcttcagacaagttcaaaactggcttc
acacttcgttttccaagagtagaggcaataaggaaagataagatgtggtacgaatgcttg
agtttaaaggaacttgaaaagctaaaatcgatggctgaaggcaaactgacgtaccaacac
actcattcagagcattcatctgaacctgcgagaaagaggcgaagggaagctttaagggtg
gaacacgtgaccagtgtagccgagcatttcaaaccagctgatttgtcatctgtgaaacaa
gtgtcgcaaatgtttgaaggcagggagttttatattgtcaatggtccttcaactcatacc
aaagccattctggagaagaaagttgcagagaacggaggtacattcactcaaaacccatcg
ccagatacatactgcgttattgccggaagaataaacgtgagagtgaagaacataataagt
cagaaacaatatgatgttgtacaagcgtcgtggctaataaagtgcttggaaaatggacaa
gtggatccatggcaaccaagtgacatgttgcattgctcgcctggcaccgctgacaagttc
gcagaggaatatgatcgctttggtgatagctacactcaggatgccaccgtggaatctctc
aaagaagtttttaacaatgtccaaaatcagaatgcttcagttcctctgtcaagagacgac
ctcctggatgtaatggagcactattttccagataattcacctatgagcctctttaaacat
tgtagggtttacgtcgatctatacactggtattggggacagctcaacgcgcattcccaac
agcaacctggaacttgttggcttgcaagttcgcttgtatggagctcaaatcacggacact
ttggataatagagtaacacatattattcttgatgaaagtgacttgacacgttttgaacaa
ctccaaagagcggacgaaagatcctcaaagcagcgtcattttgtcacgcaagactgggta
acgcagtctgtacaagaaaggaagcttttaacagaaagacattttaggccgtcaacttag
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