Montipora capricornis (leaf plate montipora): 138057977
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Entry
138057977 CDS
T10557
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
mcaz Montipora capricornis (leaf plate montipora)
Pathway
mcaz03018
RNA degradation
mcaz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138057977
09123 Folding, sorting and degradation
03018 RNA degradation
138057977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaz03019
]
138057977
03041 Spliceosome [BR:
mcaz03041
]
138057977
Messenger RNA biogenesis [BR:
mcaz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138057977
mRNA degradation factors
5'-3' decay
Lsm complex
138057977
Spliceosome [BR:
mcaz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138057977
Complex C
U2 snRNP components
138057977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
vATP-synt_E
TIG_SUH
RimP_C
LNS2
Peptidase_M16_M
Motif
Other DBs
NCBI-GeneID:
138057977
NCBI-ProteinID:
XP_068759980
LinkDB
All DBs
Position
7:complement(41327899..41334009)
Genome browser
AA seq
99 aa
AA seq
DB search
MAEEEVTNTVEEPLDLIRLSLDERIYVKLRNDRELRGKLHAYDQHLNMILSEVEETITTV
EIDEETYEELFKTTKRNIPMLFVRGDGVILVSPPLRVGL
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaagaggtcacaaacactgtggaagaaccgcttgatcttattcgcctcagc
cttgatgaaagaatttatgtgaagcttagaaatgatagagaactaagaggaaaacttcac
gcttatgatcagcatctcaacatgattttgagtgaagttgaggaaactatcacaactgtt
gaaatagatgaagagacatacgaggaactttttaagacaacaaaaaggaacatccccatg
ctgtttgtgagaggagatggtgtcattttagtttcgccacccttacgtgttgggttatga
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