Macaca mulatta (rhesus monkey): 695870
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Entry
695870 CDS
T01028
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mcc
Macaca mulatta (rhesus monkey)
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcc03036
]
695870 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
mcc03400
]
695870 (SMCHD1)
Chromosome and associated proteins [BR:
mcc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
695870 (SMCHD1)
DNA repair and recombination proteins [BR:
mcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
695870 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
SMC_hinge
HATPase_c_3
HATPase_c
Big_1
Motif
Other DBs
NCBI-GeneID:
695870
NCBI-ProteinID:
NP_001245095
Ensembl:
ENSMMUG00000005461
UniProt:
H9FRZ8
LinkDB
All DBs
Position
18:63905329..64054929
Genome browser
AA seq
2005 aa
AA seq
DB search
MAAADGGGPGGASVGTKEDGGGVGHRTVYLFDRREKESELGDRSLQVGERSDYAGFRASV
CQTLGISPEENFVITTTSRKEITCDNFDETVKDGVTLYLLQSVNQLLLTATKERIDFLPH
YDTLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNIGVRRIQIKLLFDETQGKPAV
AVIDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGK
QAVFFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSVHITN
DDERFLHNLIIEEKEKDSFTAVVITGVQPEHIQYLKNYFHLWTRQLAHIYHYYIHGPKGN
EIRTSKEVEPFNNIDIEISMFEKGKVPKIVNLREIQDDMQTLYVNTAADSFEFKAHVEGD
GVVEGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDDDCFILEKAARGKRPIFECFWNGRL
IPYTSVEDFDWCTPPKKRGLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNT
LFTRILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGIITRPDLPSKKQGPWATYA
AIEWDGKIYKAGQLVKTIKTLPLFYGSIVRFFLYGDHDGEVYATGGEVQIAVEPQALYDE
VRTVPIAKLDRTVAEKAVKKYVEDEMARLPDRLSVTWPEGDELLPNEIRPAGTPIGALRI
EILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSSSGNKEIISHISQHGGKWPYWFKKME
NFQKLGNYTLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFSCVLLDHLCRVGVP
FNIPLEFQDEFGHTSQLVTDIQPVLEASGLSLHYEEITKGPNCVIRGVTAKGPVNSCQGK
NYNLKVTLPGLKEDSQILKMKLLPGQPRRLKVKPDSEILVIENGTAFPFQVEVLDESDNI
TAQPKLIVHCKFSGAPNLPVYVVDCSSSGTSILTGSAIQVQNIKKDQMLKARIEIPSCKD
VAPVEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDIMRNLIFQMYDEGERE
INITSALAEKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFT
VRPLPDEPKHLKCEMKGGKTVQIGQELQGEVVIIITDQYGNQIQAFSPSSLSSLSIAGVG
LDSSNLKTTFQENTQSISVRGIKFIPGPPGNKDLCFTWHEFSDFIRVQLISGPPAKLLLI
DWPELKECIPVINGRDLQNPIIVQLCDQWDNPAPVQHVKISLTKASNLKLTPSNQQHKTD
EKGRANLGVFSVFAPRGEHTLQVKAIYNKSIIEGPVIKLMILPDPEKPVRLNVKYDKDAS
FLAGGLFTDFMISVISEDDSIIKNINPARISMKMWKLSTSGNRPPANAETFSCNKIKDND
KEDGCFYFRDKVIPNKVGTYCIQFGFMMDKTNILNSEQVIVEVLPNQPVKLVPKIKPPTP
AVSNVRSVASRTLVRDLHLSITDDYNNHTGIDLVGTIIATIKGSNEEDTDTPLFIGKVRT
LEFPFVNGSAEIVSLVLAESSPGRDSTEYFIVFEPRLPLLSRTLEPYILPFMFYNDVKKQ
QQMAALTKEKDQLSQSIIMYKSLFEASQQLLNEMKCQVEEARLKEAQLRNELKIHNIDIP
TTQQVPHIEALLKRKLSEQEELKKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMV
ISWHLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRPLPHFRNGKLY
FKPIGDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLL
TRDGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLILGEQIDLLQQYRSAVCKVD
SVNKDLNSQLEYLRTPDMKKKKQELDEHEKNLKLIEEKLGMTPIRKCNDSLRHSPKVEMT
DCPIPPKRMRREATRQNRIITKTDV
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggacggcggcgggcccggcggggcctctgtggggactaaggaggatggc
ggaggcgtcggccacaggacggtgtacttgtttgaccggcgcgaaaaggagtccgagctc
ggggaccggtctctgcaggtcggggagcgctcggactacgcgggatttcgcgcctctgtg
tgtcagacacttggcatttcacctgaagaaaactttgttattacaacaacaagtaggaaa
gaaattacctgtgataattttgatgaaactgttaaagatggagtcaccttgtacctgcta
cagtcagtgaatcagttactactgacagctacgaaagaacgaattgacttcttacctcac
tatgacacactggttaaaagtggcatgtatgaatattatgccagtgaaggacaaaatcct
ttgccatttgctcttgcggaattaattgacaattcattgtctgctacttctcgtaacatt
ggggttagaagaatacagatcaaattgctttttgatgaaacacaaggaaaacctgctgtt
gcagtgatagataatggaagaggaatgacctctaaacagcttaacaactgggccgtgtat
aggttgtcaaaattcacaagacaaggtgactttgaaagtgatcattcaggatatgttcgt
ccagtaccagtgccacgcagtttaaatagtgatatttcctattttggtgttgggggcaag
caagctgtcttctttgtcggacaatcagccagaatgataagcaaacctgcagattcccaa
gatgttcatgagcttgtgctttctaaagaagattttgagaagaaggagaaaaataaagag
gcaatatatagtggatatattagaaacagaaagccctctgattctgttcacattacaaat
gatgatgaaagatttctacataatctcatcatagaggagaaggaaaaagatagctttact
gctgtggttatcacaggggtacaaccagaacacatacagtacttgaaaaattatttccac
ctttggacacgacagttagcgcatatttatcattactatattcatggcccaaaaggaaat
gaaatacgaacatcaaaagaagttgaacctttcaacaatattgatattgaaatttctatg
tttgaaaaagggaaggtacctaagattgtcaacctaagggaaatacaagacgacatgcag
acgttgtatgtaaacacagcagctgacagttttgaattcaaagctcatgttgaaggagat
ggtgtagtggaagggattatccgttatcatccattcttatatgatagagaaacctaccct
gatgatccatgctttccatcaaaattaaaagatgaagatgatgatgatgattgtttcata
cttgagaaagcagctagagggaaaaggcctatttttgaatgtttttggaatggacgatta
ataccatatacatcagttgaagactttgactggtgtactcctcctaagaagagagggctt
gcaccaattgaatgctacaatagaatatctggtgcattattcactaatgacaaattccag
gtcagcacaaataaactgacgtttatggatcttgagctaaaattgaaagataagaacacc
ctttttacaaggattttaaatggacaggaacagcggatgaaaattgacagagaatttgct
ttgtggctgaaggattgtcatgaaaagtatgataaacaaataaaatttacgctttttaag
ggaataattacacgtcctgatcttccttctaaaaagcaaggtccctgggcaacatatgca
gcaatagaatgggatggaaagatatacaaagcaggacagctggtcaagacaatcaagaca
cttcctctcttttatggaagcatagtaagattttttctttatggcgatcatgatggagaa
gtatatgctactggaggagaggttcaaattgcagtggaacctcaggcactatatgatgaa
gtaagaactgtgccaattgcaaagctggataggacagttgctgagaaagctgttaaaaaa
tatgtagaagatgaaatggcaaggctccctgatagattgtcagtaacttggcctgaagga
gatgaattattgcctaatgagattaggcctgctggaacccctattggtgcattaagaatt
gaaatattgaataaaaaaggggaagcaatgcaaaagcttccaggaacaagccacggaggg
tcaaaaaaactcctggttgagctcaaagttattttacattcttcaagtggaaataaagag
attatttcgcatattagtcaacatggaggaaaatggccttactggtttaaaaaaatggaa
aactttcagaagttggggaattataccttgaaattacaagttgtattgaatgaaagtaat
gcagacacttatgcaggaagaccgctaccatctaaagcaattaagttttctgttaaagag
ggtaagccagagaaattttcttgtgttcttctggatcatctttgtcgtgttggagttcca
tttaatatccctctggagtttcaggatgaatttggtcataccagtcaactagtaactgat
attcagccagttcttgaagcaagtggtttatctttacattatgaagaaataaccaaagga
ccaaattgtgtaattcgaggagttacagctaagggccctgtaaactcttgtcaaggcaag
aattataatctgaaggttactctgccgggcttaaaagaagactcacagattttgaaaatg
aaattactacctggtcagcctcgtcgattgaaagtgaaacctgattccgaaattttagtt
atagaaaatggaacagctttcccatttcaggtggaagttttagatgaatcagacaacata
acagcacaaccaaaattgattgttcattgtaagttttcaggtgctccaaaccttccagtc
tatgttgtagattgcagtagttccggaaccagtattttaacaggatctgcaattcaagtt
cagaatattaaaaaagaccagatgcttaaagcaagaattgaaatacctagttgtaaagat
gtggcacctgtggagaagactattaagttacttcccagtagccatgttgcaagactacaa
atattcagtgtggaaggacaaaaggcaattcagatcaaacatcaggatgaggttaattgg
atagcaggtgatattatgcgtaatcttatttttcaaatgtatgatgaaggagaaagagaa
atcaatataacatccgctttagcagaaaaaattaaagttaattggactcctgagattaac
aaagagcacttgctacagggtcttcttcctgatgtgcaagtaccaacatctgtaaaagat
atgcgctattgccaggtttctttccaagatgatcatgtgtctttggaaagtgcatttaca
gtaagaccacttcctgatgaacctaaacatctaaaatgtgagatgaaaggaggaaaaacc
gtacagattggccaagagcttcaaggagaagtagttataataattacggatcagtacgga
aatcagattcaagcattttcaccaagttctttatcttctttgtcaattgctggggttgga
cttgatagctcaaatttgaaaacaacctttcaggaaaacacacagagtataagtgtaaga
ggcatcaaatttattccaggtcctcctggaaataaggatctttgttttacttggcacgag
ttttctgactttattcgagtgcaactaatttctggacctcctgctaaacttcttcttata
gactggccagaactgaaggagtgcattccagtgattaatggaagagatttacagaaccct
attattgttcaactttgtgatcagtgggataatccagcaccggtacaacatgttaaaata
agtcttacaaaagctagcaatttaaagctcacgccttcaaaccaacagcataaaacagat
gagaaaggcagggctaatttgggagtattcagtgtttttgcccctagaggagagcatact
ctgcaggttaaagccatctataacaaaagtatcatagaaggacctgtaattaagttaatg
attcttccagatccagaaaaacccgttcgtctcaatgttaaatatgacaaagatgcttcc
ttcttagcagggggtcttttcactgattttatgattagtgttatttctgaagatgacagt
atcattaaaaatattaatccagcacgtatttccatgaaaatgtggaagctatctaccagt
gggaaccgacccccagcaaatgcagaaacatttagttgtaataaaataaaagataatgac
aaggaagatggctgcttctatttcagggataaagtaattcctaataaagtggggacatat
tgtatccagtttggttttatgatggataaaacaaatattctcaacagtgaacaggttata
gttgaagtcctgcctaatcaacctgtgaagttagtacctaaaattaaaccacctacacca
gctgtttctaatgttcgctcagttgccagtaggaccttggtcagagatctacatcttagt
atcacggatgactacaacaaccatactggaattgatttggttggcactataatagccacc
attaaaggctctaatgaggaagatactgataccccactgtttatcgggaaagttagaaca
cttgaattcccctttgtgaatggttcagctgaaatcgtgagtctggtgctggcagaaagt
agtcctggaagggatagtactgaatattttattgtatttgagccccggctaccactttta
tcaagaaccttagaaccatatatcctaccattcatgttttacaatgatgttaagaagcag
caacaaatggcagcacttacaaaagaaaaggaccaattatctcagtctattattatgtat
aaaagtttatttgaagccagccaacagcttcttaatgaaatgaaatgtcaagttgaagaa
gcaagattaaaagaggcccaattgcgaaatgaactaaaaatacataatattgacattcct
acaacacaacaggtgccacacattgaagcgcttctgaaaagaaagctatcagaacaggaa
gaactgaagaaaaaacctagaagatcatgtactcttccaaactatactaaaggcagtggg
gatgttttgggaaagattgcacatctagcacaaattgaagatgatagagctgcgatggtt
atttcttggcatctggcaagtgacatggactgtgtagtcaccctaaccactgatgctgca
cgtcgtatctatgatgaaacccaaggtcgtcagcaggtgttgccccttgattctatttat
aagaagactcttccagattggaaaagacctctacctcatttccgaaatggaaaattgtat
tttaaacccattggagatccagtctttgctcgagacttgttaacatttccagataatgta
gaacattgtgaaacagtatttggtatgctgttaggagacaccattattttggataatctg
gatgcagccaatcattatagaaaagaggttgttaaaattacacactgtcctacactgctg
accagagatggagatcgaattcgaagtaatggaaagtttgggggccttcagaataaagct
cctccaatggataaacttcggggaatggtatttggagctccagtaccaaaacagtgtctg
atcttaggggaacaaatagatcttcttcagcagtatcgttctgctgtgtgcaaagtagac
agtgtgaataaggatcttaacagtcaattagagtaccttcgcactccggatatgaagaag
aaaaagcaagaacttgatgaacatgagaaaaatctcaaactaatagaggagaaactaggt
atgactcccatacgtaagtgtaatgactcattgcgtcattcaccaaaggttgagatgaca
gattgtccaattcctcctaaaagaatgagacgagaagctacaaggcaaaataggattata
accaaaacagatgtgtga
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integrated database retrieval system
