Mycolicibacterium celeriflavum: MCEL_16760
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Entry
MCEL_16760 CDS
T08164
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mcee
Mycolicibacterium celeriflavum
Pathway
mcee03030
DNA replication
mcee03410
Base excision repair
mcee03420
Nucleotide excision repair
mcee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCEL_16760 (ligA)
03410 Base excision repair
MCEL_16760 (ligA)
03420 Nucleotide excision repair
MCEL_16760 (ligA)
03430 Mismatch repair
MCEL_16760 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcee03032
]
MCEL_16760 (ligA)
03400 DNA repair and recombination proteins [BR:
mcee03400
]
MCEL_16760 (ligA)
Enzymes [BR:
mcee01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MCEL_16760 (ligA)
DNA replication proteins [BR:
mcee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MCEL_16760 (ligA)
DNA repair and recombination proteins [BR:
mcee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MCEL_16760 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCEL_16760 (ligA)
MMR (mismatch excision repair)
DNA ligase
MCEL_16760 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MCEL_16760 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
BBY43381
UniProt:
A0A1X0BMU1
LinkDB
All DBs
Position
complement(1704231..1706342)
Genome browser
AA seq
703 aa
AA seq
DB search
MTSKGAEDALAEQAGEGLDADVRRRWQELADEVREHQFRYYVRDSPIISDAEFDKLLREL
QALEDDHPELRTPDSPTQLVGGAGFATDFTPAEHLERMLSLDNAFTPEELAAWAGRIKGE
IGPELVQDAHFLCELKIDGVALSLVYRDGRLERAATRGDGRTGEDVTLNARTIDDVPERL
TGTKEFPVPKVLEVRGEVFFRVADFEELNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTA
RRKLRMICHGMGRAEGFRPKTLHDAYRALKAWGLPVSEHTAQVKGMDAVTERIAYWGEHR
HDVEHEIDGVVVKVDDVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIKVNVGRTGRV
TPFAWMEPVKVAGSTVSQATLHNASEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDG
SEREFVMPTHCPECGTSLAPAKEGDADIRCPNTRSCPAQLRERVFHVAGRGAFDIEGLGY
EAATALLQAGVIADEGDLFTLGSQDLLRTDLFRTKDGNLSANGKRLLVNLHDAKSKPLWR
VLVALSIRHVGPTAARALATEYGSLDAIMAASEEELSVVEGVGPTIAAAVTEWFTVDWHR
AIVDKWRAAGVRMADERDASIARTLEGLSIVVTGSLTAFSRDDAKEAIVARGGKAASSVS
KKTAYVVAGDSPGSKYDKAVELGVPVLDEEGFARLLENGPEGI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccaaaggcgcggaagacgcactggccgagcaggccggcgaaggccttgacgcg
gacgtgcgtcgccgttggcaggaactcgccgacgaggtccgtgagcaccagttccgctac
tacgtgcgcgactcgccgatcatcagcgacgccgagttcgacaagctgctgcgcgaactg
caggccctcgaggacgaccaccccgagctgcgcaccccggactcgccgacgcagttggtc
ggcggcgccggcttcgccaccgacttcacgccggccgagcacctcgagcggatgctgagc
ctggacaacgcgttcacgccggaggaactggccgcgtgggcgggccggatcaagggcgag
atcggccccgaactggtgcaggacgcgcacttcttgtgcgagctgaagatcgacggcgtg
gcgctgtcgctggtgtaccgcgacgggcgcctggaacgcgccgccaccagaggtgacggc
cgcaccggtgaggatgtcacgttgaacgcccgcaccatcgatgacgtccccgaaagactc
accggcacaaaagaattccccgtcccgaaggttctcgaggtgcgcggcgaggtgttcttc
cgggtggccgacttcgaggaactcaacgccgggctggtcgccgagggcaagccgccgttc
gccaatccgcgcaacagcgccgctgggtcgcttcggcagaagaacccggccgtcacggcg
cggcgcaagctccggatgatctgtcacggcatgggccgcgccgaaggtttccggccgaag
accctgcacgacgcctaccgggcgctcaaggcgtggggcttgccggtctccgagcacact
gctcaagtcaaggggatggacgcggtcaccgagcgcatcgcctactggggtgagcatcgc
cacgacgtcgagcacgaaatcgacggtgtggtggtcaaagtcgatgacgtcgcactgcaa
cgccgcctcggatcgacgtcgcgggcgccgcgctgggcgatcgcctacaagtacccgccc
gaggaggcgcagaccaagctgctcgacatcaaggtcaacgtcggacgcaccggccgggtg
accccgttcgcgtggatggagccggtcaaggtggccggctcgacggtcagccaggccacg
ttgcacaacgcgtccgaggtcaagcgcaaaggcgtgctcatcggtgacacggtgatgatc
cgcaaggccggtgatgtgataccggaagtgctcggccccgtcgtcgacctgcgcgacggt
tccgaacgcgagttcgtgatgccgacgcactgtcccgagtgcgggacctcgctcgcgccg
gccaaggagggcgacgccgacatccgctgcccgaacacccggtcgtgtccagcgcagttg
cgggaacgcgtgtttcacgtcgcgggccgcggcgcgttcgacatcgaggggttgggctac
gaagcggcgaccgcgctgctgcaggccggcgtcatcgccgacgagggcgacctgttcacg
ctcggcagccaggacctgctgcgcaccgacttgttccggaccaaggacggcaacctgtcg
gccaacggcaagcggttgctggtgaacctgcacgacgccaagtccaaaccgctgtggcgg
gtgctcgtcgcgctgtcgatccgccacgtgggaccgacggcggcccgcgcgctggccacc
gagtacggcagcctggacgcgatcatggcggcatcggaggaggagttgtcggtcgtcgag
ggtgtgggcccgacgatcgcggccgcggtgaccgaatggttcaccgtcgactggcaccgc
gcgatcgtcgacaagtggcgcgccgccggggtgcggatggccgacgaacgcgacgcgagc
atcgcgcgcaccctcgagggactctcgatcgtcgtcaccggctcgttgaccgcgttctcc
cgcgacgacgcgaaagaggcgatcgtcgcgcgcggcggcaaggcggccagctcggtgtcg
aagaagaccgcctatgtggtcgcgggcgactctcccggctccaagtacgacaaggccgtc
gagctgggcgtcccggttctcgacgaagaagggtttgcgcggctgttggagaacggcccc
gagggcatctga
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