KEGG   PATHWAY: mcep03060
Entry
mcep03060                   Pathway                                
Name
Protein export - Mugil cephalus (flathead mullet)
Description
The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
mcep03060  Protein export
mcep03060

Other DBs
GO: 0043952 0043953
Organism
Mugil cephalus (flathead mullet) [GN:mcep]
Gene
124996389  hspa5; endoplasmic reticulum chaperone BiP [KO:K09490] [EC:3.6.4.10]
124999219  sec63; translocation protein SEC63 homolog isoform X1 [KO:K09540]
124999387  srp9; signal recognition particle 9 kDa protein [KO:K03109]
124999774  spcs3; signal peptidase complex subunit 3 [KO:K12948] [EC:3.4.-.-]
125003804  srp68; signal recognition particle subunit SRP68 [KO:K03107]
125004181  get3; ATPase GET3 [KO:K01551] [EC:7.3.2.7 7.3.-.-]
125005288  tmem208; transmembrane protein 208 [KO:K27164]
125005773  immp1l; mitochondrial inner membrane protease subunit 1 isoform X1 [KO:K09647] [EC:3.4.21.-]
125005856  sec11a; signal peptidase complex catalytic subunit SEC11A [KO:K13280] [EC:3.4.21.89]
125006818  [KO:K10956]
125006890  sec61a1; protein transport protein Sec61 subunit alpha-like 1 [KO:K10956]
125007335  spcs1; signal peptidase complex subunit 1 [KO:K12946] [EC:3.4.-.-]
125008386  srp72; signal recognition particle subunit SRP72 isoform X1 [KO:K03108]
125009790  sgtA; small glutamine-rich tetratricopeptide repeat-containing protein alpha [KO:K16365]
125010412  sec62; translocation protein SEC62 [KO:K12275]
125011630  ubl4a; ubiquitin-like protein 4A [KO:K23388]
125012051  oxa1l; mitochondrial inner membrane protein OXA1L isoform X1 [KO:K03217]
125012830  srp19; signal recognition particle 19 kDa protein [KO:K03105]
125013163  srprb; signal recognition particle receptor subunit beta [KO:K12272]
125013334  srpra; signal recognition particle receptor subunit alpha [KO:K13431]
125013408  spcs2; signal peptidase complex subunit 2 [KO:K12947] [EC:3.4.-.-]
125015228  immp2l; mitochondrial inner membrane protease subunit 2 isoform X1 [KO:K09648] [EC:3.4.21.-]
125016285  sec61b; protein transport protein Sec61 subunit beta [KO:K09481]
125016527  bag6; large proline-rich protein BAG6 isoform X1 [KO:K23390]
125019809  bag6l; large proline-rich protein BAG6 [KO:K23390]
125022229  get4; Golgi to ER traffic protein 4 homolog [KO:K23387]
125023335  srp14; signal recognition particle 14 kDa protein [KO:K03104]
125023693  srp54; signal recognition particle 54 kDa protein [KO:K03106] [EC:3.6.5.4]
Reference
  Authors
Dalbey RE, Robinson C.
  Title
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
  Journal
Trends Biochem Sci 24:17-22 (1999)
DOI:10.1016/S0968-0004(98)01333-4
Reference
  Authors
Berks BC, Sargent F, Palmer T.
  Title
The Tat protein export pathway.
  Journal
Mol Microbiol 35:260-74 (2000)
DOI:10.1046/j.1365-2958.2000.01719.x
Reference
  Authors
Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
  Title
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
  Journal
J Biol Chem 275:16717-22 (2000)
DOI:10.1074/jbc.M000800200
Reference
  Authors
Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
  Title
TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
  Journal
J Biol Chem 275:41350-7 (2000)
DOI:10.1074/jbc.M004887200
Reference
  Authors
Rapoport TA
  Title
Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
  Journal
Nature 450:663-9 (2007)
DOI:10.1038/nature06384
Reference
  Authors
Flower AM
  Title
The SecY translocation complex: convergence of genetics and structure.
  Journal
Trends Microbiol 15:203-10 (2007)
DOI:10.1016/j.tim.2007.03.001
Reference
  Authors
Osborne AR, Rapoport TA, van den Berg B
  Title
Protein translocation by the Sec61/SecY channel.
  Journal
Annu Rev Cell Dev Biol 21:529-50 (2005)
DOI:10.1146/annurev.cellbio.21.012704.133214
Reference
  Authors
Paetzel M, Karla A, Strynadka NC, Dalbey RE
  Title
Signal peptidases.
  Journal
Chem Rev 102:4549-80 (2002)
DOI:10.1021/cr010166y
Reference
  Authors
Paetzel M, Dalbey RE, Strynadka NC
  Title
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
  Journal
Pharmacol Ther 87:27-49 (2000)
DOI:10.1016/S0163-7258(00)00064-4
Reference
  Authors
Ng SY, Chaban B, VanDyke DJ, Jarrell KF
  Title
Archaeal signal peptidases.
  Journal
Microbiology 153:305-14 (2007)
DOI:10.1099/mic.0.2006/003087-0
Reference
  Authors
Desvaux M, Hebraud M, Talon R, Henderson IR
  Title
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  Journal
Trends Microbiol 17:139-45 (2009)
DOI:10.1016/j.tim.2009.01.004
Reference
  Authors
Nakatogawa H, Murakami A, Ito K
  Title
Control of SecA and SecM translation by protein secretion.
  Journal
Curr Opin Microbiol 7:145-50 (2004)
DOI:10.1016/j.mib.2004.01.001
KO pathway
ko03060   

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