Mugil cephalus (flathead mullet): 124999037 Help Entry 124999037         CDS       T08342                                  Symbol thbs1b Name (RefSeq) thrombospondin-1 isoform X1   KO K16857   thrombospondin 1 Organism mcep  Mugil cephalus (flathead mullet) Pathway mcep04115   p53 signaling pathway mcep04145   Phagosome mcep04148   Efferocytosis mcep04350   TGF-beta signaling pathway mcep04510   Focal adhesion mcep04512   ECM-receptor interaction mcep04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:mcep00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     124999037 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124999037 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     124999037 (thbs1b)    04148 Efferocytosis     124999037 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     124999037 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     124999037 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     124999037 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mcep04131]     124999037 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mcep00536]     124999037 (thbs1b) Membrane trafficking [BR:mcep04131]  Endocytosis   Phagocytosis    Opsonins     124999037 (thbs1b) Glycosaminoglycan binding proteins [BR:mcep00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124999037 (thbs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF TSP1_CCN Laminin_G_3 EGF Motif Other DBs NCBI-GeneID:  124999037 NCBI-ProteinID:  XP_047429734 LinkDB All DBs Position 21:4073371..4084846 Genome browser AA seq 1168 aa AA seqDB search MKLTGIFLLLMLWTCEGAIVAESRDDSVYDLFDLIQVPNSNHGVTQVKGDDPYSPAYKIL NPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKKDGSGPVLEIVSN GKANTLDIVFSTEKKQQLVSIEDVDLATGHWKNITLFVQEDRAQLYTGCEEVNTAELDAP IQSILTQETPASAQLRVGKGAVKDRFMGVLQNVRFVFRTTLDTILRNKGCQSSVETDTMI LKNLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLVSMFKELKGLGVVVKELSNELRQLTDE NKLIKSRFGIHSGVCIHNGIVRKNKDEWTVDDCTECTCQNSATVCRKISCPLIPCANATV PDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTRD CYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCEGEGRQTN KCQKDPCPINGNWGPWSPWDTCTLTCGGGVQTRKRMCNDPVPKHGGKECVGDAKDTQMCN KKACPIDGCLSNPCFAGAKCTSFPDGTWKCGKCPAGYSGNGIKCKDVDECKEVPDACFEF NGVHRCENTDPGYNCLPCPPRYSGAQPFGRGVEQAAANKQVCTPRNPCLDGSHECNKNAR CNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNLP NSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCPYNSN PDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHNP DQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDNDG IPDDKDNCRLAFNPDQLDTDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQM VPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNSVDFSGTFFINTERDDDY AGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALWH TGNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSIYDKT YAGGRLGLFVFSQEMVYFSDLKYECRDV NT seq 3507 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacagggatatttttgctattgatgctttggacttgcgagggtgccatagtc gcagagagtcgagacgacagcgtgtacgatttgtttgacctcatccaagtccccaattcg aaccacggggtcacccaagtgaagggagacgacccgtacagtcccgcctataagatcctc aacccggacctgatccccccggtccccgagagcgcctttagggacctgatcgactccatc cacgccgagaggggcttcctcctcctgctcaacttcaagcagttcaagcggaccaggggg agcctcctgaccgtggagaagaaggacggctccggacccgtgctcgagatcgtctccaac ggcaaagcgaacaccctggacatcgttttctccaccgagaaaaagcagcagctggtctcc atcgaagatgtggatctggccacgggccactggaagaacatcacgctgttcgtgcaggag gaccgggcgcagctgtacacgggatgcgaggaggtgaacaccgcagagctggatgcgccg attcaaagcatcctgacgcaggagactccggccagcgcgcagctccgggttggcaaggga gccgtgaaggacaggttcatgggggtcctccaaaacgtgcggtttgtgtttagaacaaca ttggacaccatcctccgcaacaaaggatgccagagctcagtggaaaccgacaccatgatc ctgaagaaccttaacggctcctcagccatcagaacagagtacactggacataagactaaa gacctgcagatggtgtgcggattctcctgtgaggacctggtcagcatgttcaaggagctg aaaggcctcggtgtggtggtcaaggagctgtccaatgaactccgccagctgacggatgag aacaagctgatcaaaagccgcttcggcatccacagcggcgtctgcatccacaacggcata gtgcgcaagaacaaagacgagtggaccgtcgacgactgcaccgagtgcacttgtcagaac tctgctaccgtgtgccgcaaaatctcctgccccctgatcccctgcgctaacgctaccgtt ccagacggagaatgctgcccacgctgtggaacaccgagcgactatgcagaggatggctgg tcgccgtggtctgaatggacccattgttccgtgtcctgtgggcggggcatccagcagcgt ggccgctcttgcgaccgtatcaataacaactgcgagggcacctctgtgcagactcgcgac tgctacctccaggagtgtgacaagcgcttcaagcaggacgggagctggagccactggtca ccctggtcatcgtgctcagtcacctgtggtgccggtgtcatcacccgtatccgcctctgc aactcccccacccctcagctcggaggcaaagactgcgagggagagggccggcaaaccaat aagtgtcagaaggatccatgtcccatcaatggcaactggggaccctggtcgccctgggat acgtgcaccctcacctgtggaggtggtgtccagactcgcaaacgcatgtgcaacgatcct gtgccgaaacatggtggtaaagagtgtgttggtgatgccaaagacacccagatgtgcaac aagaaggcctgccccatcgatgggtgcttatccaacccctgctttgctggagccaagtgc accagtttccctgatggtacctggaagtgtggaaagtgcccagctggctattctggcaat ggaatcaagtgtaaagatgttgacgagtgcaaggaggttccagatgcttgcttcgagttt aacggcgtgcaccgctgtgagaatacagatcctggctacaactgtttgccctgccctcct cgctattcaggagcacagccctttggccgcggtgtggagcaggctgctgctaacaaacag gtgtgcacaccccgtaatccctgcctggacggaagccatgaatgcaacaaaaatgctcgc tgcaactaccttggacacttcgctgatcccatgtaccgctgtgagtgcaagcctggttat gctggcaatggtcacatctgcggagaggacaccgatctggatggatggcccaatgccgac ttggtttgtgtggagaatgctacctaccactgcaaaaaggacaactgtcccaacctcccg aactcggggcaggaagattacgataaggacggcattggagatgcttgcgacaatgatgat gacaacgatggcattcctgatgacagggacaactgtccattcgtgtacaatcccaggcag tatgactatgaccgtgacgatgtgggcgaccgctgtgacaactgtccctacaacagtaac ccagaccagacagacacagacaacaatggagaaggggatgcctgtgccgtggacattgat ggagatggcattctgaatgagaaggacaactgtccctacgtatacaatgttgaccagaga gacacggatctggacggggtgggagacatgtgcgataactgccctctggaacataatcct gatcaggtggattctgatgacgatcgcgtgggagacaagtgcgacagcaaccaggacatc gatgaggacggacaccagaacaacctggacaactgcccatacatccccaatgccaatcag gccgaccacgacaaagacggcaaaggggacgcctgcgaccacgatgacgacaatgatggc atccccgatgacaaagacaactgcagactggctttcaatcccgatcagctggacacggat ggtgacggccgtggagacgcttgcaaagatgatttcgatcaagacaatgttcctgacatc tatgatgtgtgtcctgagaactttgacatcagtgagacagacttccggaagttccagatg gttcctctggatccaaaaggaacgtcccagatcgatcccaactgggtggtccgccatcag ggcaaagagctggttcagacggtcaactgtgaccctggcattgcagttggttaccatgaa ttcaattcagtggacttcagcgggactttcttcatcaacacagagagggacgatgattac gccggcttcgtttttggctaccagtccagttccaggttctacgtggtgatgtggaagcag atcacacagacgtactggtccaacaaacccaccaaggcccagggctactccggcctgtcc attaaagtggttaactccactactggcccaggagagcacctccgaaatgctctttggcac acaggcaacaccccaggacaggtccgcactctttggcacgaccctaagaatgttggatgg aaagacttcaccgcctacaggtggcatctgatccacaggccaagaacaggacatattcga gttgtgatgtacgagggcaagaagatcatggcagactctggtagcatctatgacaagacg tacgcaggtggaaggctaggacttttcgtcttctcgcaagagatggtatacttctcagac ctcaagtatgaatgcagagatgtataa

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