Mugil cephalus (flathead mullet): 125004278
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Entry
125004278 CDS
T08342
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125004278 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125004278 (kdm2aa)
04121 Ubiquitin system [BR:
mcep04121
]
125004278 (kdm2aa)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125004278 (kdm2aa)
Enzymes [BR:
mcep01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
125004278 (kdm2aa)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
125004278 (kdm2aa)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125004278 (kdm2aa)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125004278 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
125004278 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
Cupin_8
F-box
PHD
Nop14
C1_1
LRR_Zer-1
Roughex
Motif
Other DBs
NCBI-GeneID:
125004278
NCBI-ProteinID:
XP_047434731
LinkDB
All DBs
Position
2:11278281..11294744
Genome browser
AA seq
1338 aa
AA seq
DB search
MDDAKPRCSKRLRSGTRRRYHDDGISDEEIDGRRMFDLEEKVSSKRFSSDRIIRMEGKDF
SYEFVQRGGLRDPLLFEKPDGLGMKMPDPDISVNEVKMFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPPSQRDKIYNVISLEFSHTKLENLVKRPTTVDLIDWVDNMWPRHLKERQR
DSTNSINDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGTKVFWLIPPTSQNLQ
LYEEWVLSGKQGDLFLGDRTSDCQRIELRQGCTFFIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPMQLNISNIEDRTRVPVKFRYPFYYEMCWYVLERYVFSLTKTSYLTPEFQKHSLGIG
LKKPAGLGLASEHVKEEEDEEEEEDEEDEDGSGSDEEDLGQQSDKDLKVHMTPFELEGLW
NLLGKLESLPSNKKCVPAGIHNAPALITHIKALLKEHANDSPKLSYVGKPIVKWPKRPSW
YQPPPPPPPPPRPKLASTPIIPRPQKPASSMSVLRRRRVRCKRCEACMRPECGDCNFCRD
MKKFGGPGKLKQTCVLRQCLSPGLPLSAVCEICKEPNQEETGELSLTLMECSNCAQIVHP
ACLTVQGEGVVNKDLPSCWECPKCVQGITDPESSGSDESLAAGHRQHIRPHGPLVLRLGP
GPSATIGGPVGSQQDGEVVHCGFFPSPLPSCSSSSSASLLLVAAPLPSQPISSRLSKGDR
GDGLPVKRKSSSLLDARIAKIYRRQRHSRDGDDSASDDDDASHRRKMLHARAGSHSSRKA
FGANRRGLLRGGSAHRGNRGALVSQSSSVLKLKRGMGIREAGRRGRGVRLRGGSSMQRRG
DEFEDSDDDDDDDDDEDEEEEEEEEEEEDSEDGDRERQHRRRRRRHRTDDEEDDDDEDSE
GQEFDPEEEEMDTLEDEEDEDVQDEGHWDSDPEPPVLLVSDLNDDLLSGSYLTVTLQSPH
KTKRQSGSIVPKLEAAMGQRSASVSGGVQQGFIQRKTALSKPSRLKHDSTSDSISPRGPG
RPRLRGGHGDKGSRTRSSSSSEDEAAPASSCLSPLSLLNLPSFKDVGNEREGEKEVWVSV
FRYLTRAELLACMTVCRAWYKWSCDKRLWSHIDVSRCSPLSNQALAGIIKRHPTSLDLSW
TPLAKRQLNCLLTRLPGLRELRVTGLSWSCLSALVSPTLPHLRLLDLRWCDGLKDAQIKE
IITVPGLESSRSRLKNMVTLCLSGLDVSDSTLRLIQRHMHQLEKLDLAHCKDITDSSIAL
LAAAGTHTRNNLTELILAGCSELTDGCLSYLKRLSSLTLLDLRGCRGISRRACDSFISDL
SHVALYCMMEEKFIQRLD
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgccaaacctcggtgcagcaaaaggctgcggtctggcacccggcgacgttac
cacgatgacggtatttcagatgaggagattgatggaaggagaatgtttgacttggaggag
aaagtcagcagcaagaggttcagctctgaccggattattcgcatggagggaaaagacttt
tcctatgagttcgtccagagaggtggcctgagggacccactcctttttgagaagcctgat
ggacttgggatgaagatgccagatcctgacatcagtgtcaatgaagtcaagatgtttgtc
ggtagtagacgcatgatagacgtgatggatgtgagcactcagaaggggacagagatgtcc
atggcccagtggacacgttactatgagacccctccgtctcagagagacaagatctataat
gttatcagcctggagttcagccacaccaaactggagaacctggtcaagagacctaccacc
gtagacctcatagactgggtggacaacatgtggcctcgtcatttgaaggagagacagaga
gattcaaccaattccatcaatgacatgcagtaccccaaagtacagaagtactgtctgatg
agcgttgagggctgttacacagactttcacattgactttggagggacttcggtttggtac
cacattctgagagggaccaaggtgttctggctgatccctccaacctcccagaacctgcag
ctctatgaggagtgggtgctgtcaggaaaacagggagatcttttcctgggagacagaaca
tccgactgccaaaggattgaactgaggcagggctgcaccttcttcataccctcaggttgg
attcacgctgtgtacacccctgtggactctatggtgtttggaggaaacttcctgcacagc
ttcaacatccccatgcaactcaatatctctaacatagaagacagaacgcgggtgccggtg
aagtttcgttaccccttctactatgagatgtgctggtatgtgctggagcgctacgtcttc
agtctcaccaagacctcctacctgacgccagagtttcagaaacactccctgggcattggt
ctgaagaaacccgctggcctgggactggccagtgagcacgtcaaagaggaggaggacgag
gaggaggaggaggatgaggaagacgaggatggcagtggtagtgatgaagaagatttaggg
caacagtctgacaaggaccttaaagtccacatgactccgtttgagctggaggggctgtgg
aacctgctgggtaaactggagtctctgccctccaacaaaaagtgtgttccagcagggata
cacaacgcaccagcactcattacacacatcaaggcgctgctaaaggaacatgccaatgac
agtcccaaactgtcctatgtgggaaaacccatcgttaagtggccgaagaggccgtcatgg
taccagcctcctcctcctccacctccacctcctcgtcctaaactggcctccactccgatc
atcccgcggcctcagaaaccagcttcttccatgtctgtgctgaggcggcgcagggtcaga
tgtaagcgctgtgaagcctgtatgagaccagagtgtggagactgtaacttctgcagagac
atgaaaaagtttggaggcccagggaagctcaagcagacctgtgtgctacggcagtgtctc
tctccgggccttcctctgtctgcagtgtgtgagatctgcaaggagcccaaccaagaggaa
actggggaactgtccctcactctgatggagtgctccaactgtgcacagatagtccatcct
gcctgcctcacggtccaaggggaaggagtggtgaataaagacctgcccagctgttgggag
tgtccaaagtgtgtccaggggatcactgatccagagtcatcaggtagtgatgaatcgttg
gctgcaggccaccgacagcacatccgcccccacggccccctggtcctcaggctgggtccc
gggccctctgctaccatagggggtcctgtgggctcccagcaggatggggaggttgtccac
tgtggtttcttcccttctcctcttccatcctgctcttcctcctcctccgcttcacttctg
ttggtggcggcccctctgccttctcagccaatcagctcgagactgtcaaaaggcgacaga
ggggacggccttccagtgaaaagaaaatcctcttccctgctagacgcgcgtatagctaag
atttacagacgacagcgacacagccgtgatggggacgactctgccagtgatgacgatgat
gcatctcatcgaagaaagatgcttcatgcccgagcggggagccactcctccaggaaggcg
ttcggtgccaacaggagaggcctgctgagaggaggctcggctcacagaggaaacagagga
gctcttgtgtctcaaagctcctccgtcctcaaactgaagcgagggatgggcataagggag
gctgggcgcaggggacgaggcgtgaggctgcggggcggctccagcatgcagcggaggggg
gacgagtttgaggattcggacgacgatgacgacgacgacgacgacgaggacgaggaagag
gaggaggaggaggaggaagaggaggacagtgaagacggagacagggagcgacagcatcga
cggcgcaggaggagacacaggactgatgatgaagaggatgatgatgatgaagacagcgag
gggcaggagttcgaccctgaggaggaggagatggacactctggaagacgaagaggatgaa
gacgtccaggacgaagggcactgggattcagacccagaacctccggtgcttctggtgtct
gatctgaatgacgacctgctgagtggctcctacctgacggtcactctgcagagcccccac
aagaccaagagacagtccggctccatcgttccaaagctggaagcagccatgggtcagagg
agcgcttcagtcagcggaggagttcagcagggcttcatccagagaaagacggctctgtcc
aaaccttcacggctcaaacacgactccacatccgacagcatttcccccagaggacctggc
aggcctcgtctgaggggtggccacggggacaaaggcagtagaacccgctcatcgtcatct
tcagaagacgaagctgctcctgcgtcctcctgtctgtctcccctgtccttactcaatctg
ccgtccttcaaagacgtgggcaatgagagagaaggggaaaaggaggtgtgggtgtctgtg
ttcagatacttgaccagagctgagctgctggcctgcatgaccgtgtgtagggcgtggtat
aagtggagctgtgataaacgtctgtggagccacattgatgtgagtcggtgcagcccgctc
agcaaccaagccctggcaggcatcatcaaacgccaccccacctcgctggatctgtcctgg
acacccctggccaagagacagctcaactgtttgctcactaggctcccaggtcttagggag
ctgagggtgactggtttgtcctggtcctgtctgtcagcgctggtttctcccactctgcca
cacctgcgcctgctggacttgcgctggtgtgacggcctgaaagacgcacagattaaagag
atcatcactgtacctggtttggagtcgtcccgcagccgactgaagaacatggtgacgctg
tgtctgtccggtctggacgtcagtgactccactctgaggctcattcagcgacacatgcac
cagctggaaaagctggacctggctcactgcaaggacatcacggattcctccatcgcactg
ctggcggcagcagggactcacactcgcaacaacctcactgagctcattctggcaggttgc
agcgagttaacagacggctgtctgtcttacctgaagcgtctctcttctctgactttgttg
gacctcagaggttgcaggggcattagcagacgagcctgcgacagcttcatttctgacttg
tctcatgtggctctctattgtatgatggaggagaagttcatccagcgcctggactaa
DBGET
integrated database retrieval system
