Mugil cephalus (flathead mullet): 125004322
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Entry
125004322 CDS
T08342
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03272
Virion - Hepatitis viruses
mcep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125004322 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125004322 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125004322 (ldlrb)
Membrane trafficking [BR:
mcep04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125004322 (ldlrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
EGF
EGF_3
hEGF
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
125004322
NCBI-ProteinID:
XP_047434798
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All DBs
Position
2:1207276..1219760
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AA seq
865 aa
AA seq
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MKKGLTGLSTCWFLLMLIHCLTEADAAFTCSSSQFKCGNGRCITRRWTCDETDDCGDGTD
ELPATCADKTCLETEFNCGAPMNQCIPGGWHCDGKADCKNEADEKNCTAKQCQDDEFRCN
NGQCISTSFVCDSDHDCSDGSDEVLCPKPTCNSRSFQCNNSVCVPALWRCDGDRDCLDGS
DEWPQNCAGRDTEKKGRCSSQEFQCANGECIHSSWRCDGGMDCQDRSDEFNCSQPTCRPD
EFQCKDGICIHGSRQCDGVADCPDLTDENGCHIEESECEGPNKFKCRSGECISMEKVCNK
QRDCIDWSDEPVKECGTNECLKENGGCSNLCNDLKIGYNCSCPAGYILMNDKKTCEDIDE
CAEPDTCSQICINLPGSYKCDCDKGYEIDPVTKTCKAESGTVPTLFFTNRHEVRKLTVDR
REYVHVITQLKNAVAVDMDIPNKMIFWSDLSLKKIYSSKINVASNSSHHNVVIGSGTEAP
EDIAVDWIHGNIYWTDSVLKTISVATTDGSKRKTLISERLDKPRAITIDPVNNFMYWTDW
GEEAKIEKSGLNGADRVALVTDNIVWPNGITLDLVNRRLYWVDSKLHTLSSIDVNGGTRH
TVIFNEEVLSHPLSLAVFEDKVFWTDMSNKAVFSASRLTGKGITKLATDLAQPEDIVLYH
NLKQPISTDWCRESNNMNGGCEFLCLPAPQINPQSPKYTCACPDNMTMGDDMRKCATGAV
VPPTKSKTAVPPLTNTPKKLPTTTLPIRTTTTTTTTTTAMATSVNTQPVPTAQGNRLDAL
PKEAHPVHPVALYVVLALAVLCLMVFGAVYLWRNWRLKNTNTIHFDNPVYQKTTEDEVHI
GRNSSDSGFVYPQRQMLSTEDMDIA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagggactcaccggactgtccacatgttggtttctgctgatgctgattcattgt
ttgactgaagcggatgcagccttcacatgcagctcttctcagtttaagtgtggaaatggg
aggtgcatcactcgcaggtggacttgtgatgaaactgatgactgtggtgatggaactgat
gaactgcctgccacctgtgcggacaaaacctgtctggagacagaattcaattgtggtgcc
ccaatgaatcagtgtataccaggaggctggcactgtgatggcaaagctgactgtaagaat
gaggctgatgagaaaaactgcacggctaaacaatgccaagacgatgagtttcgctgtaac
aacggccagtgcatatccacatcatttgtttgcgacagcgaccatgactgttccgatggt
tcggatgaggtgttgtgccccaaacccacctgtaactcccggtccttccagtgcaacaac
tcagtgtgtgtgccagcactgtggcgctgcgatggagacagggactgcctcgatggttca
gatgagtggccacaaaactgtgcgggaagggacacagagaagaagggacgctgcagctcc
caagagttccagtgtgccaatggggagtgtatccatagcagctggcggtgcgatggaggc
atggactgccaggatcgctcagacgagttcaactgcagccagcctacttgccgtccagat
gagttccagtgtaaagacggcatctgtatccatggcagccgccagtgtgatggtgtcgcc
gactgcccggacctcactgatgagaatggttgccacatagaggaaagtgaatgtgagggc
cccaacaagttcaagtgtcgcagtggggagtgcatcagcatggagaaagtgtgcaacaag
cagagagattgcattgactggtctgatgagcctgtgaaagagtgtggcaccaatgagtgc
cttaaagaaaacggtggctgctccaatctttgcaatgatctgaaaattggctacaactgc
tcctgccctgctggatacatcctgatgaatgacaaaaaaacatgtgaagacatcgatgag
tgtgctgagccagacacttgcagtcagatctgcatcaacctgcccggcagctacaagtgt
gattgtgacaagggctatgagattgatcctgtgactaaaacatgcaaagcagaatcaggc
acagtacccaccctcttcttcactaacagacatgaggtgaggaagttgacagtggaccgc
agagaatacgtccatgtgatcacacagctgaaaaacgctgtggctgtggacatggatata
ccaaacaagatgatcttctggtccgatctgtcgctgaagaaaatctacagctccaagata
aatgtggccagtaactcttctcaccataatgttgtaattgggagtggcactgaggcccct
gaagacattgcggtggattggatccatggtaacatctactggactgacagcgttttgaag
actatatctgtggctacgacagatggcagtaagaggaagaccctaatttcagaaaggctg
gataagccaagggccatcacgattgatccagttaataactttatgtattggactgactgg
ggtgaggaggctaagattgagaagagtggactgaacggagcggatcgtgttgccttggta
acagacaacattgtgtggccaaacggcatcaccctagacctggtcaaccgccgtctgtac
tgggtggactccaagttgcatactctctccagcattgatgtgaatggagggactcgacac
actgtcatttttaatgaggaggtgctctcccacccactctccctggctgtctttgaggat
aaagtattttggacagacatgagcaacaaggccgtttttagtgccagccgccttacagga
aagggtatcaccaagctggcaacagacctggcccaaccagaggacattgtcctctaccat
aacctcaagcagccaattagcacagactggtgcagagagagtaacaatatgaatggaggt
tgtgagttcttatgcctccctgctccccagatcaacccccaatctcccaaatatacatgt
gcctgtcctgacaacatgacaatgggagatgacatgaggaaatgtgcaacaggtgcagtt
gtccctcctacaaaaagcaaaactgctgtgcctcccttgaccaacactcccaagaaactt
cctacgaccacactgcccatccgtaccactaccactactactacaactactacagccatg
gctacctcagttaatacacagcctgtccccactgctcaaggtaacagactagacgcttta
cccaaagaagcccaccccgtccaccctgttgctctctatgttgtgttggctctagcagtc
ctgtgcctgatggtctttggagcggtgtacctatggagaaactggcgtctgaagaacaca
aacaccatccactttgacaatccggtgtaccagaagacaactgaggatgaagtacacatt
ggcaggaatagttctgacagcggctttgtttatcctcagcgacaaatgctgagcacggag
gacatggatattgcatga
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