Mugil cephalus (flathead mullet): 125004435
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Entry
125004435 CDS
T08342
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125004435 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125004435 (smcr8b)
Membrane trafficking [BR:
mcep04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
125004435 (smcr8b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
BH3
PHC2_SAM_assoc
Motif
Other DBs
NCBI-GeneID:
125004435
NCBI-ProteinID:
XP_047434980
LinkDB
All DBs
Position
2:20439567..20449775
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AA seq
910 aa
AA seq
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MIGSPDLLAFTGTEGFGEREDVRVAQGLPEDLSVPLLPSCHPWTTSAQFNRDFILVAEFS
EQVGPKPVLTIPDDPRVIGSFDLNHFSVRIMSVDYQASGPGHTPPSTSGPRLNFSEDSKV
ILGDSAEDAFAYVHHVTLYDLEARGMVRPFCMAYVCSDQAKLMENFSELSTRFSQASDSL
KTGNRQAFSMELQRKLQELEYRRLTLLQDAEHQRTPNGLPDVEEKDDELEAVEHSISTHR
DLLRQITSYPNRKLKEPDFLPYDPADSLTDPMSLQPPEPCASFSTFTSCRSELKSLQELC
NSYFLSLMKEQLADTERRLRGDKSALRTTRLVCSLSRRLKLTGFLFEPWSPEDVEEDERE
SDEVELQGTAGAKRGDDTSQSQPLSLESFYSCVEEIPIKLEAREAGTVTPDPSAAAEMTG
SVSSGDSIEVLGTEKSYRTQHVVTGSDSRDAAVGVTDAVVRRAGADVGVKRVQACARRAN
SEDSIEVLSTTESIFPDDLTAITEEEAEPLTNGVDNEEEPRTGGEESTVKAATVVNENDE
PGQEDEDGADREECAVKLTDNAGVVIKAELDAMNHVHEDGDAQKTSKLWKAVLKIEVTPP
SPEVHQEVRPGTDLHVNYVHAVSLSDVDHWSPPGPPLRLLSIDEASDCTSFTGYSEPPSP
TQNFKSSPCLKKKTTTTTRRKAGLRALRFIKQHSFSQHAVFCLLSGRPLVVIGGDETLLR
KLVDALSLFLPAPGPGGGAVMPCLTRPLLFTDLLTWRLIGIHRSSSISSAAVLHSLTRYS
RYLSLLDLDQRTLRSPSYSGSLIGRMTDAHSGFRRGVTYLLHLESCLTALTSQVLLYMFT
AAFRRPRAAGAKGGTEEDPQCTGGPCSSESDLRVMHFLSDLITQRHAGRGPPVLGFSYSL
VHLHRNTYAA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggtccccggacctgctggccttcaccggcaccgagggcttcggagaaagagag
gatgtccgggtggctcagggtctacccgaggacctctctgtccccctgttgccttcatgt
cacccctggaccacatcagcccagttcaacagagacttcatactggtggctgaattctct
gagcaggtgggtccgaagcctgtgttgacgatacctgacgaccccagagtcatcggctcc
ttcgacctcaaccacttctctgttcgcatcatgtctgtggactaccaggcgtccggcccc
ggccacacccctccctccacatctggcccccggctcaatttcagcgaggactccaaagtc
atcctgggagactcggcggaggacgcctttgcgtacgtccaccacgtgaccctgtacgac
ctggaggcccgggggatggtgcgtccgttctgcatggcctatgtctgctcggatcaggcc
aagctgatggagaacttttccgaactgtcgacgcgcttctcccaggcgtcggacagcctc
aagacgggaaacagacaagcgttttccatggagctgcagaggaaattacaagagcttgag
tacagacgcttgactctgctccaggacgcagaacatcagaggactccaaatgggctccca
gacgtcgaagaaaaagacgacgagctcgaagccgtggagcactcgatctctactcacaga
gacctcctccgccagatcacgtcctacccaaacaggaagctcaaagagcccgacttcctg
ccctacgacccggccgactccctcactgatccgatgtcgctgcagcctcctgagccctgc
gcctccttctccaccttcacctcctgcaggtctgagctgaagtcgctccaggagctttgc
aactcctacttcttgtccctgatgaaggagcagctggcggacacagagcggcgtctgcgc
ggcgacaagagcgccctgcgaactacgcgtctcgtatgctcgctgtcccggaggctgaag
ctcaccggcttcctgtttgagccgtggagcccagaggacgtggaggaggacgaaagggag
agcgatgaggtggagctgcagggaaccgcaggcgcaaagaggggtgacgacacgtcgcag
tcgcaaccgctgagcctggagtcgttctactcctgcgtggaagagatccccataaaactg
gaggcgcgagaagccgggacggtgacccctgaccccagcgctgcagcagagatgacgggg
agtgtgagcagcggagacagcattgaagtgctcgggactgagaagtcttatcggacacag
catgttgttaccggatctgacagcagagacgcggcggtcggtgtgacagacgctgttgtc
agacgcgcaggagcagacgtgggcgtcaagcgcgtgcaagcgtgcgccagacgggccaac
agcgaagacagcatcgaagtgctcagcaccacagagtccatatttcccgatgacctcacc
gctatcacggaggaggaggcagaacctctgactaacggggtcgacaacgaggaggagcca
cggacgggtggagaggagagcacagtgaaggcagctaccgtagtaaatgagaatgatgag
cctggacaggaagatgaagatggtgctgacagagaagagtgtgcggtgaaattgacagat
aatgctggtgtcgtgatcaaagcagagctggacgctatgaatcacgtccatgaagacgga
gatgcacagaagacgtccaaactctggaaagccgtattaaaaatcgaggtgacgcctccc
tcgcctgaagtccatcaggaggtgcggcctgggactgacctccatgtgaactatgtccat
gctgtttccctgtcggatgtggaccactggtctccccccggccctcctctgagactgctg
agcatcgacgaggcgtctgactgcaccagctttaccggctactcagagccgccctctccc
acccaaaacttcaaaagcagcccctgcctgaagaagaagacgacgacgacgacgagacga
aaggctggactgagagccctgaggttcatcaagcagcactcgttctcccagcatgccgtg
ttttgtctcctgagcggccgaccgctggtcgtcatcggcggagacgagactctgttgagg
aaactggtggacgccctgagcctcttcctacctgctccaggtcctggtggaggagctgtg
atgccgtgtttgaccaggccccttctgttcaccgacctgctcacctggagactgatagga
atacacaggtcgtcctccatttcttcggccgccgtcctccactctctgactcgctacagc
cgctacctgtctctcctggacctggaccagaggacgctgcggagcccgtcgtactcgggt
tctctcatcggcagaatgaccgacgctcactcggggttccggcggggcgtcacctacctg
ctgcacctggagagctgcctgacggccctgaccagccaggtgctgctgtacatgttcaca
gccgcgttccgacgcccgcgcgccgccggggcgaagggcggcacggaggaggacccgcag
tgcacggggggaccgtgcagcagcgaaagcgatttgagagtgatgcacttcctgtcggac
ctcatcacgcagcgccacgcgggtcgtggacccccggttttaggattctcttacagctta
gtgcatctccacagaaacacatatgcagcataa
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