Mugil cephalus (flathead mullet): 125005122 Help Entry 125005122         CDS       T08342                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism mcep  Mugil cephalus (flathead mullet) Pathway mcep04010   MAPK signaling pathway mcep04120   Ubiquitin mediated proteolysis mcep04140   Autophagy - animal mcep04144   Endocytosis mcep04620   Toll-like receptor signaling pathway mcep04621   NOD-like receptor signaling pathway mcep04622   RIG-I-like receptor signaling pathway mcep05132   Salmonella infection mcep05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:mcep00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     125005122 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     125005122 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     125005122 (traf6)    04140 Autophagy - animal     125005122 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     125005122 (traf6)    04621 NOD-like receptor signaling pathway     125005122 (traf6)    04622 RIG-I-like receptor signaling pathway     125005122 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     125005122 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     125005122 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mcep04131]     125005122 (traf6)    04121 Ubiquitin system [BR:mcep04121]     125005122 (traf6) Enzymes [BR:mcep01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      125005122 (traf6) Membrane trafficking [BR:mcep04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     125005122 (traf6) Ubiquitin system [BR:mcep04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     125005122 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 TRAF3_RING TRAF6_Z2 RING_XB3-XBAT31 U-box zf-rbx1 zf-TRAF_2 Sina_ZnF DM Tropomyosin BLI1 DUF7310 CEP104_ZnF Motif Other DBs NCBI-GeneID:  125005122 NCBI-ProteinID:  XP_047436088 LinkDB All DBs Position 3:19971363..19977088 Genome browser AA seq 570 aa AA seqDB search MACFESTKGSLEEDSYEGGVEELSSCAIAMQGKENESLASPSESPGTYISGTSASFQAAA PLQGYDVEFDPPLESKYECPICLMALRNAVQTRCGHRFCKSCIEKSIRDTGQRCPVDNES LSEDQLFPDNFAKREILSLTVRCPNSGCADKMELRHLENHLQQCQFATAPCPQCLQSVRK SRLEEHTTVECGRRPMLCPDCVTEFVYEERELHMQQCPFASVKCQYCEMDLIRDQIESHC DTDCPKAPIACNFSIFGCKERMLRHNLAQHMQEFTQMHMRYMAEFLRGLSLNGTTPRSLW TSGPSVSSESEVAAASVTTCSGLRSAASCASSCAPGQPSEENHRLREMDGRLVKQDHQLR ELIILKETQAGQLAELRRRVSMLEETVKELEGQQCHGIFIWRLKGFSGHLRSQEAGMPVV EHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGVFDGQLTWPFQGTIRLAI LDQGPEGQHHVEVMETKPDLQAFQKPTIQRNPKGFGYVTFMHLHQLAQRAFVKDDTLLIR CEVTPRFDSMLHREGPAVQPRGPEASFSRD NT seq 1713 nt NT seq  +upstreamnt  +downstreamnt atggcttgctttgaaagcaccaaggggagtctggaggaggacagctatgagggaggtgta gaagagttgtccagctgtgccatagcaatgcagggaaaggaaaatgaatcccttgctagc ccttcggagagcccgggcacctacatcagtggcacctctgcaagttttcaggctgctgcc ccccttcagggctacgacgtggagttcgacccacccctggagagtaaatatgagtgccct atctgcctcatggctctgaggaatgccgttcaaacacgctgcggtcaccgtttctgcaag agctgtattgagaagtccattcgtgatacaggacagaggtgtcccgtggacaacgaatcg ctgtcagaagaccagctgtttcctgacaactttgccaaaagggagattctttcactgact gttcgctgtccaaactctggctgtgctgacaaaatggagctccgacatttagagaatcat ttgcaacagtgtcagtttgccactgcaccttgcccacagtgtctgcagtctgtgagaaag agccgcctagaggagcacacaactgttgagtgtggaagaagacccatgttgtgtccagac tgtgtgacagagtttgtttatgaggagagagagcttcatatgcagcagtgtccctttgcc agtgtgaagtgtcagtactgtgagatggatctcatcagggaccagatcgaatctcattgt gacacagattgcccgaaagcacccattgcctgtaactttagcatcttcggctgtaaggaa aggatgctgcgccacaacctagctcagcacatgcaggagttcacacagatgcatatgcgc tacatggctgagtttctgcgtggcctcagcctgaacggcaccacacccagatccctgtgg acgtcgggaccttccgtttcttcggagagtgaagtagctgcagcgtcagtaacgacatgt agtggactcagatcagctgcaagctgcgccagcagctgtgctccgggtcagcccagcgaa gagaaccacaggctcagagagatggatggacgattggtgaagcaggatcatcagctgcgt gagctcatcatcttaaaagaaacacaagcaggccagcttgcagagctccggcgtagggtg tcaatgctggaagagacagtgaaggagctggagggccagcagtgccacggtatcttcatc tggcgcctcaaagggttctctggccacctacggagccaagaagcgggcatgcctgtggtc gagcacagccccggcttctacacaggccgcccgggctacaagctgtgtctgcgcttacac ctgcagacgcccaacgccccacgctgctccaactacatctccctgttcgtccacaccatg caaggagtttttgacgggcagctgacctggccgtttcaagggaccatccgactggccatc ctagaccagggcccagagggtcagcatcacgtggaggtgatggagactaagccagacctg caagcgttccagaaacccactattcagcgcaaccccaaaggattcggatacgtcaccttc atgcacctgcatcagctggctcagagagcttttgttaaggatgacacgctgcttatccgc tgtgaggtgacaccacgttttgacagtatgcttcatcgggaaggtccagcagtacagcct agagggcctgaggcatcattttcaagagactga

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