Mugil cephalus (flathead mullet): 125008222
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Entry
125008222 CDS
T08342
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04010
MAPK signaling pathway
mcep04020
Calcium signaling pathway
mcep04510
Focal adhesion
mcep04540
Gap junction
mcep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125008222 (pdgfrb)
04020 Calcium signaling pathway
125008222 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125008222 (pdgfrb)
04540 Gap junction
125008222 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125008222 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mcep01001
]
125008222 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mcep04090
]
125008222 (pdgfrb)
Enzymes [BR:
mcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125008222 (pdgfrb)
Protein kinases [BR:
mcep01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
125008222 (pdgfrb)
CD molecules [BR:
mcep04090
]
Proteins
125008222 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
Adeno_E3_CR1
C2-set_2
Ig_6
PPC
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
125008222
NCBI-ProteinID:
XP_047441323
LinkDB
All DBs
Position
5:14062318..14088209
Genome browser
AA seq
1109 aa
AA seq
DB search
MRMVTAFTLHLTVTFTALLYFCTDVCCLEITPDDKEIVLAEGSTLTLTCSGSTEPNWTFK
KEDVPFFQAQPVQNGQPSHQIVQSGATSSNLTLFNVSWKHTGVYQCNDQYTGETKEVAVF
VPDPNVWFIERFHGMVTKTNEESTIPCVVTNPSINVTLFEKDTDVPIKGVYDPSEGYRAS
LEDRNYMCRGELNGKVQESQSFYVFSIAVPEAIDAYINASKTVLKQGEPLTVNCTVHGLE
LAFFTWETPNRELIDVDPLTDILSTTNMRSYLIFPHTTMAHSGTYICNIFEGIQGHSTSA
SVTINVLEQGFVALKPAQQQNISTMLQENVVLRVEIEAYPPPQIQWTKDGAIIKGDKIIT
FRQEHEIRYVTILTLVRVRTDQKGLYTVRVTNGDDAKQVTFDLEVRVPSQIKDLTDHHLP
GNRHLVTCVAEGVPTPTIEWYSCDSMLKGSNQTEVWQPLTPEPEVLSIQHNVTYSAARKT
SQVRSQVTFHKPQQVTVRCETSNQVGLVDRRDVKLVVSSTQYSQVTVIMAVILALAVIAI
LSTIILIAVWKKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDHLVLGRTL
GSGAFGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVN
LLGACTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYAEKTPDDGCLISRGSTPLSQRK
GYVSFGSESDGGYMDMSKDEPSVYVPMQEHIDTIKYADIQPSPYESPYQQDLYQEQGGSR
LDLVISDTPSLTYNDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGL
ARDIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDL
PMNELFYSALKRGYRMAKPAHASDEVYDIMKKCWDEKFEKRPEFSSLVHRVGNMLMDSYK
KRYSQVNDNFLKSDHPAVARTKPRLSSPFPIANPAFGSPTPTTTSSSSPLGPYNQNPRPG
DFRQEADPLEVVTSYNEYIIPIPDPKPEETFTDEPSESPVSSLALEEETDSMSQDTADTL
PEEDRLEETSEKDALLGSSGTPEVEDSFL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggtgacggcattcacgcttcacctgacagttacatttacagctctcctgtat
ttctgcactgacgtgtgctgcctggagatcacgcctgacgacaaggagatcgtcctggct
gagggctccactctcaccctcacctgctccggctccaccgagcccaactggacgttcaag
aaagaagacgtgcctttctttcaggcacaaccagtccaaaatggtcagccgagccaccag
attgtgcaaagtggcgccacgtccagcaatctgacgttgtttaatgtgagctggaagcac
acgggcgtgtatcagtgcaatgatcaatacactggggaaacgaaggaggtggctgtgttt
gtcccagatccgaatgtgtggttcatagagagattccatggcatggtgacaaagaccaat
gaggaaagcaccatcccctgcgtggtcaccaacccgagcattaatgtcaccctgtttgag
aaggacaccgacgtgccaatcaagggggtgtatgaccccagtgagggctacagggcatcg
ctggaggataggaattatatgtgtcgcggagagctgaacgggaaggtgcaggagtctcag
tccttctacgtcttcagtattgctgtcccggaggccatcgacgcctacatcaacgcttca
aagaccgtcctgaagcagggcgaaccgctgacagtaaactgcacagtgcacggactggag
ctggcctttttcacttgggaaacgcccaacagagagctcattgacgttgatccgctgaca
gacatcctttccaccacgaacatgcgctcctacctgatcttccctcataccaccatggcc
cacagtggaacctacatctgcaacatctttgagggtatccaaggccactcgacctcagcc
agcgtcaccatcaatgtgctcgagcaaggttttgtggccctgaagcctgcccagcaacaa
aacatttccaccatgctgcaagagaacgtggtgctaagggtggagatcgaggcctaccct
ccaccccagattcaatggaccaaagatggcgccatcatcaagggagacaaaatcatcaca
ttcagacaagagcatgaaatcaggtatgtcactattctcaccttggtgagggtgaggacg
gaccagaagggcctctacactgtccgtgtcaccaacggagatgacgccaagcaagtgacc
tttgacctggaggtccgagttccctctcagattaaagacctgaccgaccaccacctccca
gggaacagacacttggtgacctgcgtagctgagggggtcccaaccccaaccatagagtgg
tacagctgtgacagcatgctcaagggcagcaaccagaccgaggtgtggcagccgctgaca
cctgagccggaggttctgagcatccagcacaatgtgacctacagcgcggcgcgtaaaacc
agccaggtccgcagccaggtgactttccacaagcctcagcaggtcacagtccgctgcgag
accagcaaccaagtgggcctcgtggacaggagagacgtcaaactggtggtgtccagcacc
caatactctcaggtgaccgtgataatggctgttattctagccttagcggtgatcgctatc
ctgtctaccatcatcctgattgctgtgtggaaaaagaagcctcgctacgagatcaggtgg
aaggtgatagaatctgtgagccaggacggacacgagtacatctatgtggaccccatccac
ctgccctatgacctggcctgggaaatgccccgggaccacctggtgctgggtcgcactctt
ggatcgggagcgtttggcagggtggtcgaggcaactgcttacggtctcacgcattcccag
tccagcacaaaagtggcagtgaaaatgctcaaatctacagccaggcggagtgagacccag
gcactcatgtcagaactgaagatcatgagccacctcggtcctcacctcaacattgtcaac
ttactcggagcttgcaccaaacacggccctctctacctggtaactgagtactgtcgctac
ggcgacctggtggactacctgcacaggaacaagcacacgttcctgcagtactacgctgag
aagaccccggatgacggatgcctcatctcaagaggaagcacccctctcagtcagaggaaa
ggctatgtgtcttttggaagtgagagtgatggggggtacatggacatgagcaaagatgag
ccctcggtctacgtgcccatgcaggagcacatagacaccatcaagtatgccgacatccag
ccttctccgtacgagtctccctaccagcaggacctctaccaggaacaaggtggcagccga
ctggacctggtgatcagcgacacccccagtctcacctacaacgaccttctggggttcagc
taccaggtggcgaaggggatggagttcctcgcgtctaagaattgcgtccaccgcgacttg
gctgccaggaacgtgttgatctgcgagggcaagctggtgaagatctgcgacttcggcctg
gccagagacatcatgcacgattcaaactacatttccaaaggcagcaccttcctgcccctg
aagtggatggcaccagagagtatctttcataatttgtacacgaccctgagtgatgtgtgg
tcatacggcattctcctttgggagattttcacactgggaggaaccccttacccggatctg
cccatgaatgagttattctacagtgctttgaagagaggctaccgaatggccaaacccgct
cacgcctccgatgaagtttatgacatcatgaagaagtgctgggatgaaaagtttgagaag
aggcctgagttctcctctctggtccacagagttgggaatatgttgatggacagctataaa
aagagatacagtcaagtcaacgacaacttcctgaagagcgaccacccggcagtggcccgc
accaaaccccggctctcctcaccctttccaatcgccaacccggcatttggctccccgact
cccaccaccacctcctcctcctctcccctggggccctacaaccagaacccgaggcccgga
gacttcaggcaagaggcggacccgctggaagtcgtaacttcatacaatgagtacatcatt
cccatcccagacccgaagccagaggagactttcactgacgagccgtcagaaagccctgtg
agctctctggctctggaggaggagaccgactcgatgtctcaggacactgccgacactctt
ccagaggaggacaggctggaggagaccagcgagaaagacgctctgctaggctcctctggg
acgcccgaggtagaagacagcttcctgtag
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integrated database retrieval system
