Mugil cephalus (flathead mullet): 125011874
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Entry
125011874 CDS
T08342
Symbol
kdm2ba
Name
(RefSeq) lysine (K)-specific demethylase 2Ba isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125011874 (kdm2ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125011874 (kdm2ba)
04121 Ubiquitin system [BR:
mcep04121
]
125011874 (kdm2ba)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125011874 (kdm2ba)
Enzymes [BR:
mcep01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
125011874 (kdm2ba)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
125011874 (kdm2ba)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125011874 (kdm2ba)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125011874 (kdm2ba)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
125011874 (kdm2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
PHD
Motif
Other DBs
NCBI-GeneID:
125011874
NCBI-ProteinID:
XP_047447296
LinkDB
All DBs
Position
8:complement(18937471..18948419)
Genome browser
AA seq
811 aa
AA seq
DB search
MRNMIQSLSRSQHNPTQQTNQIDGAPTSHLAVRKGPAANRSQISQHLQRSSGQRAANRPK
PKMATTSAVKLPSNRSSSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSC
IMRQCIAPVLPHTAVCVVCKEAGKEDTLEDEEDKFNFMLMECSICNEIVHPNCLKVSDAS
GVVNDELPNCWECPKCNHAGKSGKVLKQKRGPGFKYASNLPGSLLREQKPVKEEGDVSSA
AKRRPEREETPRYRPEDPLHRQPPLLSPSNLPRPRPEDKLRKKRKLFEDDEEGDPSVRKK
ERSEDPYFLHRIKTEAEDEDAYVDDYEEGKESHFRSIAERRGRFGEAEEDGDYKDSKSDL
LNPCIKTAIGDSDQSHCSSPQAGPSSEGGSETQEKGPRPKARRKRRLPNKELSRELSKAL
NQEIQKTEDCLANENRQPLKVEPETENEEPKRLFRNGNELGDQRAHLKTKEINGTPWELR
HFYPSQITPLGFNRSTPTTRPVPPRSPPKCVQMERHVIRPPPISPPPDRLPLKDGKTHVI
QREVWMKIFGYVTHQELCVCMRVCKTWNRWCCDKRLWTRIDLNRCTSITPLMLSGIIRRQ
PLSLDLSWTNISKKQLSWLINRLPGLRVLKLSGCSWAAVSALCTSSCPLLRTLDVQWVEG
LKDPQMRDLLSPPTDNRPGQLDNRCKLRNVEDLRLAGLDITDTSLRLICRQMPLLSRLDL
SYCNHINDQSVNLLTAAGTTTRDSLTEINLSVCNRVTDHSLNFFKRCGSICQIDLRFCKQ
VTRTACERFIAEMSVSVPFRLKEDKLLQKTS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatatgattcagagtctgagcagatctcagcacaatccaacacaacaaacaaat
cagatcgatggagcacccacctcgcaccttgcagtacgtaaaggacctgcagctaaccgg
agccagatatcacagcaccttcagaggtctagtggacaacgggcagccaaccgtccaaag
cccaagatggccacgacgtcagccgttaagctgccgtccaaccgcagctcgtccggagcc
agacgcaggaggacgcgctgccgaaagtgcgaggcgtgcctccggaccgagtgcggagag
tgtcacttttgcaaggacatgaagaagttcggcgggccggggcgcatgaagcagtcctgc
atcatgagacagtgcatcgcgcccgtcctgccccacacagctgtgtgtgtggtgtgcaaa
gaagcagggaaggaggacacgctggaggacgaggaggacaagttcaacttcatgctcatg
gagtgctccatctgcaacgagatcgtccatcccaactgcctcaaggtgagcgacgcgtcg
ggagtggtgaacgacgagctccctaactgctgggaatgccccaagtgcaaccacgctggg
aaaagcggaaaagtattgaagcaaaaaaggggcccagggttcaagtacgcctccaacctc
ccgggctctttgctgagggaacagaagccggtgaaggaggagggggacgtgtcttcggcg
gccaagaggagacccgagagggaggagacgccccgataccgaccggaggatcccctgcac
cgacagccgccgctgctctccccgagcaacctgccccggcccagacctgaggacaagctg
aggaagaagaggaagctttttgaagatgatgaggaaggagatcccagtgtgaggaaaaag
gagaggtccgaggatccgtattttctgcatcgaatcaagactgaagcggaggacgaagac
gcgtacgtggacgattacgaagaaggtaaagagtcgcacttccgaagcatcgccgagagg
agagggcgcttcggagaagctgaagaagacggagattataaagactccaagagtgacctt
ttgaatccctgcattaaaacagcgatcggagacagcgaccagtcccactgcagctccccg
caggccggccccagcagcgagggcggaagcgagacgcaggaaaagggtccgcgtcccaaa
gctcgccgcaagcgccgcttgccgaacaaggagctgagccgggagctgagcaaagcgctg
aaccaggaaatccagaagaccgaggactgcctggccaatgagaaccggcagccgctcaag
gtggaaccagagactgaaaacgaggaacccaagaggttgttccgcaacggcaatgagctc
ggggatcagagggcccacctcaagaccaaagagattaacgggacgccctgggagctgcgc
cacttctacccgagtcagatcaccccgttgggcttcaacaggagcaccccgaccacccgg
ccggtgccgccgcgctcgccgcccaagtgcgtccaaatggagaggcacgtcatccggccg
cctcccataagcccgccccccgacagactgcctctgaaagacggaaaaacgcacgtcata
cagcgcgaggtctggatgaagatattcggctatgtcacacaccaggagctgtgcgtctgc
atgcgagtttgcaagacgtggaacagatggtgctgcgataaaagactttggacgaggatt
gatctgaatcggtgcacctccatcacccctcttatgctaagcgggattatccgccgacaa
ccactttccctggacctcagttggaccaacatttccaagaagcaattaagctggctcatt
aatagattaccaggcctgcgggtgttaaagctgtcggggtgttcctgggccgccgtgtct
gcgctctgcacgtccagctgtcctctgctacgcaccctggatgtccagtgggtggaggga
ctcaaagacccgcagatgagggacctcctgtctccccccacagacaacagaccaggtcag
ctggataaccgctgcaagttgcggaacgtggaggaccttcggctggcgggcctggacatc
accgacacgtctttacgcctcatctgtcgacagatgcctttgctgtccaggttggacctg
agctactgcaaccacatcaacgaccagtcagtcaacctgctgacagcagcagggaccacg
accagggactccctcacagaaatcaacctatcagtttgtaaccgagtcacagaccattcc
ctgaactttttcaagcgctgcgggagcatctgtcagatcgacctgcgcttctgcaaacag
gtgaccaggacggcctgcgaaaggttcatcgcagagatgtctgtcagcgtcccgttcaga
ctgaaagaggacaaactgctgcagaagacgagctag
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