Mugil cephalus (flathead mullet): 125014444
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Entry
125014444 CDS
T08342
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125014444 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125014444 (tdg.1)
Enzymes [BR:
mcep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
125014444 (tdg.1)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125014444 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
125014444
NCBI-ProteinID:
XP_047451458
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All DBs
Position
10:22384906..22391795
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AA seq
466 aa
AA seq
DB search
MEEKLNGSLPVVSPEYLHQWVQSARQFQALQAQYSNFDPNHQFHYPENQPGEAAMANMAN
PEPEMDQMEPANLTKPPPKKRGRAAQPKEPQAPKPPKVPKAPKAPKPPKPPKVPKAPKPP
KDPNAPKAKPGPKPKKGAEAQADGKQEKIDESFKKVKRKVDRFKGMSEEEVMKKTLPDLL
DYNLDYVIIGINPGLMAAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTTLPGKYKMG
FTNMVARATPGSKDLSSKELREGGKILVEKLKKYRPLIAVFNGKCIYEMFCRELFGKKPQ
KLEFGLQPHKIPDCDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGVRRVTEI
EEVNYSFDLSLAKEDAKRMAIKEEQYDPGYEDAYGGEYVARGPEGGQTEGQTNGHCTFST
PENTEGAQEASTSQTAEGQLPDGQWMTQSFADQIPDISGGPKDGSI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgaatggatcactgcctgttgtctccccggagtatcttcatcagtgg
gtccagtctgcccggcagtttcaggctctccaggcccaatattcaaacttcgacccgaac
catcagtttcactacccagagaatcagcctggagaggcagccatggcgaacatggctaat
ccagaacccgagatggatcagatggagccggccaacttgacaaaacccccacctaaaaag
agaggcagagcagcacaacctaaggaaccgcaggcacccaaaccaccaaaagtcccaaag
gcaccaaaggcgccaaagccacccaagccaccaaaagtgccgaaggcaccaaagcctccg
aaagacccaaacgcacctaaagcaaaaccaggaccgaagcccaagaagggtgcagaggct
caggctgacggcaaacaggagaagattgatgagagcttcaaaaaggtgaagaggaaagtg
gaccgcttcaaaggaatgtcagaggaagaggtcatgaaaaagactctaccagacctgcta
gactacaacctggactatgtcatcattggtatcaatcctgggttgatggcagctttcatt
ggacgatggtttcctggtcctggaaatcatttttggaaatgcttgtttctttctggattt
actgaggagcagctgaaccacatgcacgacaccacccttcctggaaagtacaaaatgggc
ttcaccaacatggtggcccgggctacaccggggagcaaagacctcagcagtaaagagttg
cgtgaaggcggcaaaattcttgtagagaagctgaagaagtacaggcctctcattgctgtg
ttcaatggaaaatgcatctatgaaatgttctgcagagagctgtttggcaaaaagccacaa
aaacttgaatttggtctgcagccacacaaaatccccgactgtgacgtggctctgtatctg
atgccttcgtccagtgctcgctgtgctcagttccctcgtgctcaggacaaagtccacttc
tacatcaaactgagggagctcagagatcagctgaagggcgtccgaagagtcactgagatt
gaggaggttaactactcgtttgaccttagtttggctaaagaggatgctaagaggatggca
ataaaggaggagcagtacgatcctggttatgaagatgcctatggcggagaatatgtagca
agaggacccgaaggaggccagaccgaaggccagaccaacggtcactgtacattttcaact
cctgaaaacacagaaggagcacaggaggcgagcacgtcacagacggcagaaggccagctc
ccagacggacagtggatgacccagtcctttgcagatcagattccagacataagtggcgga
ccaaaagacggcagcatatga
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