Mugil cephalus (flathead mullet): 125021323
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Entry
125021323 CDS
T08342
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04530
Tight junction
mcep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125021323 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125021323 (tiam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcep04990
]
125021323 (tiam1a)
Domain-containing proteins not elsewhere classified [BR:
mcep04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
125021323 (tiam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PH_11
PDZ_6
RNA_pol_Rpc82
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125021323
NCBI-ProteinID:
XP_047463290
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All DBs
Position
15:11058907..11110078
Genome browser
AA seq
1678 aa
AA seq
DB search
MGNVESQNGDSGFCGDATGHLSRKHTSRSLRLSGKQSIPRRSRHSSSVKQEHRNSEASTR
SSSTPSIPQSLAESGLELFNGGDEFSEFGINPHWTQRVAMTMRPESYQQDDDALATPTPE
TSEADTVAQDGGEDSMGEGEGDIIGAESYLQRMTEGPREGGSFKKKRSKSADMWREDSLE
FSLSDLSQEHLTSTEEIIGGGEEEEEERFACPRGSAGSPERASSLDHLCSQQSPGLRGQR
RRSAKNRREAECDGEGEEGLMSPAEEDGGGYGAFTLPCRRSHCLSEGLAGLGIPAAPCPA
FQGRRAQTTQDISGVLGEGSEYGDSGIDGVAAEIDGDGEPVSRRGKTMSASFSVYSAAES
SFFNGSDSGSSSAGGGEGRGGEGGRGGVYENFRKELDNHAWTNRRRDCTEEAGSAVSDEQ
SSGTLSSVYPSDTVIGCAQGTVRKAGALAVKNFLVHKKNKKVEPATKRKWKHYWVSLKGC
TLFLYESDGRTVIDHNSVPKHALWVENSIVQAVPEHPKKDFVFCLSNSVGDAFLFQTSGQ
TELENWITAIHSACAAALARQHHREDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQLSTVT
DAKKRKTILEQIFLWEQNLERFHMDLFRCRCYLASLQGGEPPNPKRLLGFASRPTKLAMG
RLGIFSVSSFHALVSARTESSIRRRNQNMHRTFSKRRSRFSSLWGLDTASKRKTKGHPSI
DQVFVDGMEPARKPLERMFEDSASEKSKEREGSVNGVPQQNVDSDIWVPDYLKPSWVCLP
NNQPVLAVIQPGETALEVLSTVCKTHKLDPSSHYLRLKVWVDNQKLFYIPKFEEDVTDLL
YKEIEICPKVTKVIRFDKAESSTIGHGFSVAVIDEDGVQRLHVTEVKAGGLASAKGLKEG
DEILLLNDKAASALQEDDMRAAFANQIFTLSVSTLPQMDSRVLCSLPPRRSEGELDSATD
IFSQSQEDILDEVSGLTVDSQDETLEEGPRLTPQEDETSTGTGQKNTEQVTAFCRSLHDM
NPLECPVSSSSSSSSSSLSPSPVSALPPAAGAATQRQLSHADKLRKVISELVETEKTYVK
DLRFLIERYLAPLQKESFLTRDELDVLFGNLGEMVEFQVEFLRTLEDGIRLVPDLERLER
VEQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPEFKAFLAERNPRQQ
HSSTLESYLIKPIQRVLKYPLLLKELYSLTDPDSEEHYHLDVAMKAMNKVASHINEMQKL
HEEYGAVFDQLINEQTADKKEVADLSMGDLLLHSTVTWMNPPGSLVKSRKDPDLAAFVFK
TAVVFVYKDSSKHRKKIGGSHRVSVTDDKDPFRFRHMIATDSLQVRALANSEVTAVCEIV
HTKSESEGRPERTFQLCCRSPESKKDFLKAVHSILREKQRRQLLKTESLPPNQQYVPFGG
KRLCALKGARPTMNRAASAPSRTLARRKQVRNRITIGTDIVFHGNNNNNSSSSSSSDAAA
AAASSASSASSRHVPCPTSSSPLSQHAPLQPPKPQGEDTDRWVEEQFNLGCYEDQCEGIG
VGQVKETDILSDDDEYCKSVRAASAEPDPLEGEMDGLGLQDKEGKLSEQGEEADEDGRRS
GSVDSFAPRSVSLSGCASPALTLAPLKQCAAEGATNQGGDVIWVRRDDFVKGCNRDVF
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgtggaaagtcaaaatggggacagcggtttctgcggcgatgccaccggacac
ctctcccgtaagcacacgtcccgctcccttcgcctctctggcaagcagtcgatcccccgc
cggtccaggcactcttcttcggtgaaacaggaacacaggaactctgaagcctcgactcgc
tcctccagcaccccgagcatcccacaatccttagcggagagtggactggaactcttcaat
ggtggggacgagttcagcgagtttggcatcaacccgcactggacacaacgcgtcgccatg
acaatgaggccggagtcctaccagcaggacgacgacgccttggccacgccgactcccgag
acctcagaggcggacaccgtcgctcaggacggaggagaggactcaatgggggagggagag
ggggacattatcggggccgaaagctacctccaacgaatgactgagggccccagagagggg
ggcagtttcaaaaagaagcggtcgaaatcggcggacatgtggagggaagacagtctggag
ttttctctgtctgacctgagccaagagcatctcaccagcactgaggagataattggtggg
ggagaagaagaagaggaggagcggtttgcgtgccccagaggcagcgcaggctcaccagaa
agggcatcgtctctggaccatctgtgcagccagcagagtcccggcctcagggggcagagg
agacgcagcgctaaaaaccgcagagaagcagagtgcgatggagaaggggaggaggggttg
atgtctccggccgaggaggatggcggcggctatggagcgttcacgctcccctgccgacgc
tcgcactgcctctctgaaggcttggcagggctcggtattccagctgcaccgtgccctgcc
ttccagggacgacgggcacagactactcaggacatctctggtgttttgggcgagggaagt
gagtatggagacagtggaatcgatggcgttgccgctgagatagatggggatggagaaccg
gtgtcccggcggggtaagaccatgtcggcctctttctcggtgtactcagccgccgagagc
agcttcttcaacggcagcgacagcgggagcagcagcgcgggaggaggagaaggaagaggg
ggcgaaggaggcaggggaggagtgtacgaaaatttccggaaggagctcgacaatcacgcc
tggacaaatcggcgccgtgactgcacagaggaggccggctccgctgtaagtgacgagcag
agcagcggcacactgagcagcgtgtacccatccgacactgtgattggctgtgctcagggc
acggtcaggaaagcaggggctctggctgtgaagaacttcctggttcataaaaagaacaag
aaggtggaacctgcaacgaagcgcaagtggaaacactactgggtttctctcaaaggttgc
accctcttcctatatgaatctgatggtcgcacggtcattgaccataacagtgtccctaaa
catgcactgtgggtggagaacagcattgtgcaagccgtgcccgaacatcccaagaaagac
tttgtcttctgcctcagcaactcagtgggtgatgctttcctcttccagacgtcaggccag
acagaactggagaactggatcacggcgatccactcggcgtgtgctgctgctctggctcgg
cagcaccacagggaggacaccgtgagactgctgcgcaccgagatccgcaagctggagcag
aagattgacatggacgagaaaatgaagaagatgggcgacatgcagctgtccactgttacc
gacgccaagaagagaaagaccatacttgagcagatcttcttgtgggagcagaacttggag
cggttccacatggatctcttccgctgtcgctgctacctggctagtctgcagggcggtgaa
cctcccaaccccaaacgcctgctgggcttcgcttcccgtcctaccaaactggccatggga
cgattgggaatcttctctgtgtcttccttccatgcgctggtgtccgctcgtacagaaagc
agcatcaggaggcggaaccagaacatgcatcgtaccttcagcaagcgccgaagccgcttc
tcctccctgtgggggctggacacggcctcgaagaggaaaaccaaaggacatccctcaatt
gaccaggtgtttgttgacgggatggagcctgccaggaagcccttagagcgcatgtttgaa
gactcggccagtgagaaatctaaggagagagagggctcggtgaacggcgttcctcagcaa
aacgtggacagcgacatctgggttcccgattacctgaagccgtcctgggtgtgcctgccc
aacaaccagcctgtcctggccgtcatacagcctggcgagacggcgctggaagtcctgagc
actgtctgcaagacgcacaagctcgacccctccagccactacctgcgtctgaaggtgtgg
gtcgacaaccagaagcttttttacatccccaaattcgaagaggacgtcaccgatctgctc
tacaaagagatcgagatttgccccaaagtgaccaaggtgatccggtttgacaaagccgag
tccagcaccatcgggcacggtttctccgtggccgttatagatgaggacggggtgcagcgg
ctccatgtcacagaagtgaaagcgggaggactggcctcagctaaaggtttgaaagagggc
gatgagattctgctgctcaacgataaagctgcctctgccctccaagaggacgatatgagg
gctgcatttgcaaaccaaatcttcaccttgagcgtgagcaccctgccccagatggactca
cgggtgctctgttcccttccaccccggcgctccgagggcgaactggactcagccacggac
atcttctcccagagccaagaagacatcctggacgaggtgtccggtttgacggtggacagc
caggatgagactttagaggaaggaccccggctgacccctcaggaagatgaaacctccacg
gggacggggcagaagaacacggagcaggtcactgctttctgccgcagtctccatgacatg
aatcccctggagtgccccgtgtcatcctcctcgtcgtcgtcttcgtcatctctctccccg
agccccgtgtcggcgctgccgccggccgcgggcgccgccacccagaggcagctctcccac
gcagacaaactgcgcaaggtcatcagcgaacttgtggagacggagaagacctacgtcaag
gacctgaggttcctgatcgagcgatacttggcacctttgcagaaagagagcttcctgaca
cgagatgagctggacgttttgtttggtaaccttggagagatggtggagttccaggtggag
tttctccgcacgctggaggacgggatcagactggtgccagatttggagaggctggaacgg
gtggagcaatttaagaaggtgttgttctccttgggcgggtcattcctgtattacgccgat
cgcttcaagatctacagcgccttttgtgccagccacaccaaggtcccgaaagtcctggct
aaagccaagacagacccagagttcaaagctttcctggccgagagaaaccccagacagcaa
cactcgtccaccctggagtcttacctgatcaaacccatccagagagtccttaaatacccg
ctgctgttgaaggagctgtactcgctcactgaccccgacagtgaggaacactaccacctg
gacgttgcaatgaaggccatgaacaaagttgcgagtcacatcaacgagatgcaaaagctt
cacgaggagtacggagccgtttttgaccagctgatcaatgagcagactgcagataaaaaa
gaggtggctgacctgtcaatgggggatcttttgctgcattcgaccgtgacgtggatgaac
cctccaggttctttggtcaagagcagaaaggaccctgatttagctgcttttgtgttcaaa
acggcagttgtatttgtgtacaaagacagctccaagcacaggaaaaagatcggtggatcc
catcgtgtgtccgtgaccgatgacaaagatcccttccgctttcgtcatatgatcgcaacc
gactctctgcaagtccgtgccctcgcaaactctgaggtcacagcagtgtgcgagatagtc
catacaaagtctgagtctgaaggaagaccggagagaactttccagttgtgctgcaggtct
ccggagagtaagaaggacttcctgaaagcggtccactccatccttagggagaagcaacgg
aggcagctccttaagacggagtctctgccgcccaaccagcagtacgttccatttggtggc
aagcgactgtgtgccctcaaaggagcacggcctaccatgaacagagcagcgtcagctccg
tctcggacgctggcccgcagaaagcaggtgaggaaccgcatcacaatcggcaccgacata
gttttccatggcaacaacaacaacaacagcagcagcagcagcagcagcgatgccgccgcc
gccgccgcctcctccgcctcctccgcctcctcccgccacgtcccctgccctacctccagt
tcaccgctgtcccagcacgccccgctccagccgcccaaacctcagggggaggacacagac
cgctgggtggaggagcagttcaacctgggctgctacgaggaccagtgcgagggcatcggc
gtggggcaggtgaaggagacagacattttgagcgacgacgacgagtactgcaagtctgtc
agggccgcctcggcggagccggaccccctggagggggagatggacgggctgggcctgcag
gacaaagaggggaagctgagcgaacagggggaggaagccgacgaagacgggcgacgttcg
ggctcggtcgactcttttgctccccgcagcgtctctctctccgggtgcgcgagcccggcc
ctgactctcgcccccttgaagcagtgcgccgcggagggggccacgaaccagggcggcgac
gtcatctgggtgcggcgggacgactttgtgaaggggtgcaaccgagacgtgttctga
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integrated database retrieval system
