Mugil cephalus (flathead mullet): 125022169
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Entry
125022169 CDS
T08342
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcep01009
]
125022169 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcep04040
]
125022169 (trpc5a)
Protein phosphatases and associated proteins [BR:
mcep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125022169 (trpc5a)
Ion channels [BR:
mcep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125022169 (trpc5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
125022169
NCBI-ProteinID:
XP_047464514
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Position
1:52442718..52626869
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AA seq
1088 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWVVKLVTCFIIGLLFPVFSLIYLLAPKSTL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTTVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSIWYLLMWLHNKLCKRGQPPGEDTHKCENLREFTERHADSLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETTRDDGAMASEDDSESVDGSGTQRSKSVSFLTPAEDDARPTPTLGVSALVRSISGMTQ
LEREQEGEGEELEEGIGWGEGEEEEEGKPKSNGLKTTVIPPSSTTVIPSPSSSFSSSFVR
TRNCLQRLSAPKTKADSFKRLSYLFSRSKRKAPPLPLPLQSPPSYTISDGLLRPLGSHSR
SDFGLSGVTRSETYLNEVGRSVGIPTPSFSPRRTNGRDTLLTLPLPPPCPCQSLHCASNM
SESSSRLLDSSEDVFQGGGVGGMSEGEAVRGGERGLGGVMMMGGWVGPCEDVIEDSCEVI
EDSVTTQL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctatgacacagttgtactacaagaaggcgacatattcgccgtaccgcgaccgc
attccacttcagattgtccgggctgaggtggaactgtctgcggaggagcgggcatacctc
acagcagtagagaaaggtgactatgcgggagtcaaacatgctctccgcgaggccgaagtc
tactacaacatggacgtgaactgcctggacccgctgggccgcagcgcgctcctcatcgcc
attgagaacgagaacctggagatcatggagctcctgctcgatcacggcatccacacgggt
gatgccctgctgtacgccatcagaaaggaggtggtgggcgccgttgagctgttgctgtca
cacaggcgacccagtggtgagaagcaggttccctcactgatgatggacagtcagttctca
gagttcacgcccgacataactcctatcatgcttgctgctcacaccaacaactacgagatc
atcaagctgcttgtccagcggaaggtcaccatccccagaccacaccagatacgatgtgac
tgtgttgagtgtgtatccagttcagaggttgacagccttcgacattcacggtcacgtctc
aacatctataaggctctggcctcgccttctcttatcgcactgtccagtgaagatcccatc
ctcactgcctttagactgggctgggagctcaaagaactcagcaaggtggagaatgaattt
cgccaggaatacgaggagctgtcgcagcagtgcaaacgtttcgccaaagaccttctggat
caggctagaagttctagagagctggagaccatcctgaaccacagagacaatgaccagagt
gaggaactggaccccagacagtgccacgacctggccaaactcaaactcgccataaaatac
caccaaaaagagtttgtggctcagccgaattgtcagcagctgctggccacgctgtggtac
gatggctttccaggctggaggcgacgacactgggtggtcaagctagtcacctgcttcatc
attggactcctgtttccggtcttctcactgatctacctgctagctccaaagagcactctt
ggccgcttcattaagaagcccttcatcaagttcatctgtcacacagcgtcctacctgacc
ttccttttcctcctgctactagcatcgcagcacattgcccgcaccaacttgcacatgcag
ggcccaccgcccaccattgtggagtggatgattcttccgtgggtgctgggcttcatctgg
gcagagatcaaggagatgtgggatggaggattcacagagtacatccatgactggtggaat
ctgatggactttgccatgaactccctctacctggccaccatatctctgaagatagtggca
tacgtgaagtataactcctctcgcccaagggaggagtgggaaatgtggcacccgacactg
atagctgaggctctgttcgccatcgccaacatctttagctcactcagactcatctccctc
ttcactgccaactcccatcttgggccactgcagatctcgctggggaggatgctgctggac
atcctcaagtttctcttcatttactgtctggtcctattggcatttgctaatggtctgaac
cagctgtacttctactatgagacaaaggcatcagaggaacccaacaactgcaagggcatt
cgctgtgagagacagaacaacgccttctcaacgttatttgagactctccagtctctgttc
tggtcgatatttggactgttaaacttgtacgtcaccaccgtgaaggcccgacacgagttc
actgagtttgtgggggcgaccatgttcgggacgtacaacgtcatctcgctggtggttctg
ctcaacatgctgatagccatgatgaacaactcctaccagctcattgccgaccatgccgac
atcgagtggaagtttgcccgcaccaagctgtggatgagctacttcgacgagggcgggaca
ctaccacctccgttcaacatcattccgagccccaagtccatctggtacctgctcatgtgg
ctccacaacaagctgtgcaagagaggccagccacctggggaggacacacacaaatgtgaa
aacctcagagagttcacagagcgccatgctgatagtctgatccagaatcaacattaccag
gaggtaatccggaacctggtgaagaggtacgtggcagccatgatacgaagtgccaagacg
gatgagggcctgacagaggagaactttaaggaattgaagcaggatatctccagtttccgc
tatgaggtcctcgatcttctcggcaaccggcgtcctccccgacgccactactcctcatcc
agtgagacgacaagagacgatggtgccatggcctctgaggacgacagtgaatcagttgat
ggcagtggaacccagagatcaaagagcgtcagtttcctgactcctgcagaggacgacgca
agaccaacgccaacacttggtgtgtctgcactggtgcgctccatttctgggatgacccag
ttagaaagagagcaagagggggagggggaggagctggaggaaggtattgggtggggggaa
ggggaggaggaggaggaggggaaaccaaagagcaacgggctgaagacaactgtcatccct
ccatcctccaccaccgttatcccctcaccatcgtcatcattctcctcatcatttgttcgc
acaaggaactgcctgcagcggctctcagctcccaagacaaaggcggactcattcaagcgc
ctctcttacctgttctcccgctccaaacgcaaagccccccccctgcctcttcctctccaa
tctccaccctcctacaccatctcagatgggttgcttcgccctctggggagccatagccgc
tctgacttcggactcagtggtgtgaccagaagcgagacttacctgaacgaggtgggccgc
tcagtcggcatccctaccccgtcgttctctcctcggagaactaatgggcgggacacactc
ctaacattgcccctccctcctccatgtccctgccaatctctgcattgtgcttccaatatg
tcagagtctagctcacgcctcctggactccagcgaggatgttttccagggtggaggtgtg
ggaggaatgagtgagggcgaagcagtcagaggaggggaaagaggattaggaggagtgatg
atgatgggtgggtgggtgggaccctgtgaagatgtcatagaggacagctgcgaggttata
gaggactccgtcaccacacagctatag
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