Mugil cephalus (flathead mullet): 125022896
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Entry
125022896 CDS
T08342
Symbol
pus3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcep03016
]
125022896 (pus3)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
125022896 (pus3)
Transfer RNA biogenesis [BR:
mcep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125022896 (pus3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Myo5a
Tropomyosin
YlqD
Motif
Other DBs
NCBI-GeneID:
125022896
NCBI-ProteinID:
XP_047465844
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All DBs
Position
16:5777641..5781019
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AA seq
470 aa
AA seq
DB search
MSAALIQRIKELESELEKLKSQLKKSSEDGGETSPPPNENLNTKSDGNTSRKERKKAGKD
RPFDFTAHPWRHVALRLAYLGWAYQGFAVQENTDNTVEARLFEALLKTRLIQDRQSSNYH
RCGRTDKGVSAFSQVITIDLRSTQFGGGLGVALPENVDVSTKSKAAAELPYVKMLNRVLP
QDIRILDWAPAAEGFSARFDCQSRTYRYYFPRGSLDVTLMADAAKRYEGTHDFRNLCKMD
VGNGVLQFERTILSASVEPVQPQHDSSTNQHDLFIFEIKGLAFLYHQVRCMMAVLLLIGQ
KLEAPEIINQLLDVEKNPRKPQYSMAVDYPLVLYDCHFEGLSWERETEELSHVLTALQQH
WTQSAVKAHVLHGMIQGLEVRGGVSSSHCLLVEGSRQRNYRPLLERPCCESLESRIKHFV
KRGRLEREEGENGGELVHRGKRSKHSHSPSAVLPVSSDMEKPSVDQKAED
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgctttaatccagcgaataaaggagctggagtcagagctggagaagcttaaa
tcccagctgaagaagagcagtgaagatggaggtgaaaccagtccacctcctaacgaaaac
ctaaacaccaagagcgacggaaacaccagcaggaaggagagaaagaaggcaggtaaagac
cgaccgtttgactttaccgcgcacccctggcgccacgtggccctgcgtctggcttacctg
ggctgggcctaccagggctttgcggttcaggagaacacggacaacaccgtggaggccagg
ctcttcgaggctctgctgaagactcggctgattcaggaccgccagagctccaactaccac
cgctgcggtcgcaccgataaaggagtcagcgctttctcccaagtcataaccatcgacttg
cgctccacccagtttggcggaggactgggcgtcgcgctccctgaaaacgttgacgttagt
accaagtcaaaagctgctgctgagcttccatatgtgaagatgttgaaccgcgtcctgcct
caggatataaggatcctagactgggctccggcagcagaaggtttcagtgcgcgcttcgac
tgtcagtcccgcacgtaccgctactacttcccccgaggatccttggatgtgacgttgatg
gcggatgctgcaaaaaggtacgagggaactcatgactttcgcaacctgtgcaaaatggac
gtgggcaacggagtcctgcagtttgaacggaccatcttgtcggcctcggtcgagcctgtg
cagcctcagcacgactccagcacgaaccaacatgacctctttatatttgagatcaagggc
ttagcttttctttaccaccaggtgcgctgcatgatggcagtgcttctcttgatcgggcag
aagctggaagccccggagataattaatcagctcctggacgtcgagaagaaccccaggaag
ccccagtacagcatggcagtagattatcctctggtgctgtacgactgccacttcgaaggt
ttgagctgggagcgggagacggaggaactgagccacgtcctgactgctctgcagcaacac
tggactcagagcgcggtcaaggcccacgtcctccacgggatgatccagggtctggaggtc
agaggtggcgtgtcctccagccactgcctgctcgtagagggcagcaggcagagaaactat
cggcctctgctggagcgtccgtgctgcgagagcctggagtccaggataaaacattttgtt
aaaagaggccgactggagcgggaggaaggggaaaacggaggcgaattggtccacagaggg
aaaaggtccaaacattcccacagcccctcggccgttctgcctgtttcttcagatatggaa
aagccaagtgtagatcagaaagcagaagattaa
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