Mugil cephalus (flathead mullet): 125023060
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Entry
125023060 CDS
T08342
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03440
Homologous recombination
mcep03460
Fanconi anemia pathway
mcep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125023060
09124 Replication and repair
03440 Homologous recombination
125023060
03460 Fanconi anemia pathway
125023060
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcep01009
]
125023060
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
125023060
03036 Chromosome and associated proteins [BR:
mcep03036
]
125023060
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125023060
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125023060
Protein phosphatases and associated proteins [BR:
mcep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125023060
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125023060
Multi subunit type E3
BRCC complex
125023060
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125023060
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
125023060
BRCA1-A complex
125023060
BRCA1-B complex
125023060
BRCA1-C complex
125023060
BRCA complex
125023060
FA (Fanconi anemia) pathway
Downstream FA components
125023060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
RTT107_BRCT_5
zf-Nse
zf-RING_5
zf-MIZ
zf-ANAPC11
zf-RING_4
PTCB-BRCT
zf-RING_10
zf-RING_6
zf-rbx1
Prok-RING_4
Sina_RING
Motif
Other DBs
NCBI-GeneID:
125023060
NCBI-ProteinID:
XP_047466095
LinkDB
All DBs
Position
16:4873301..4902353
Genome browser
AA seq
1288 aa
AA seq
DB search
MKTPKATDVKKGISVLWETLQCPICLDLMTAPVSTKCDHQFCKFCMMKLLDSSKQNKANC
PVCKSNITKRSLQESPGFQRLVLGLQDMIQAYERDTGTNYFTGMSQHKIHSSVTDAETIE
DSHVENMEITDHDDPPRSPSSTVAAQNGFARVMGLEDSVSLTTEKEGLDSGLGDAPPTSD
KKTSSPTENLEPEVVEKATSARKAKSKKRSGKLEDASLVIPDDSEPHPLRKSSRQKQKKD
VELDKILEQKKKKSVEKVAEWLMKVPAEGSLEFEKPDDNKDDSDSCSSASTIDIKRHNSD
VTSKREDRAKALEDQVFGAVYKRKGSRTVSPPLNAFVKPAIRPETQTREGVAGKKQEQEK
QNMIEEEENGTSSDIFKEAEPMEVREENGTNVQQTKKRTRNSLQQVDGDLKGPAQSDVVA
QTKTKTDKRKGKNAKSEKGKPARAAKPLVLVGVQSEETVPETRTRPEEVQVQIETYPSSE
DQETLVTRTTRRSKRVKLFPEKAEEKKTNSRKTGKDKKENTNGDTPANRNPPKIDNATKE
AKRNGCIYDQDLGGIEDTESGERKSNKKSKEAVEESITEVPNCETVSESLCCASVLPSSA
SPGVLGPTLESDKPVNHLSSNIQPQTSENKCAAVEKEEDDSELDTELLLRSFRATKRKSF
HLGNADAKRSRCSDEDNVPIRESEEDNCDSSAKKVSSSDAISPSNSPVQTRKAVLEEPDR
VAAEASIPGSASPRNSLSSALSPNKVSVCNVDNPHVSIMPQVVDSGIRFVAVENDGLNED
AGAGVTAGQVLIPESSLTPEDLLAPSLHEAKTSSHCSDEASLLSSFDIKRPLRKKRRAQR
LESSPESDGSGSKEELPTLAQIFGSSVAQRDSNEPDKDDAACVTEEAVEPPASPSPDCIS
PSQASVDLFGTPEECEVPQNEALESSQFSSEVLVTQQKIEMQQELVRLEKLMALVSEVLQ
EKEASPSKDAPAETRQGCRATDTRLMCDQDLDQSESRKDLPDAGRDPNTRPSDGKQATEP
SLEKHVGARMAEEEHSTHTGLIAKEETLNAPSATRTLNDRGSVSDGQEDKENDTPPEERR
KPKLVLASSGLSSSEQIMVKKFAKRVGARVVSKVTAEVTHVVMHTDEQLVCERTLKYFLG
IAGRKWVVSFQWISECFKQKKLLDESPFEVRGDVVNGPNHQGPSRARTTEDSNLLMRGYT
ICFQGPFTDMTTDDMEWMVELCGAAVVKDPLLLDGRQKSHQLIIVQPRPESSTSTYSNLS
RKATVVTRGWLLDTVAMYTLQNYSNYTT
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccccaaaggccactgatgtcaaaaaggggatttcggttctttgggagactctg
caatgtcccatatgcttggatttaatgactgcgccagtatctacaaagtgtgaccatcag
ttttgcaaattttgtatgatgaaacttttggacagttccaaacaaaacaaggccaactgt
cccgtgtgtaaatccaacataaccaaaaggagtttgcaggagagccccgggtttcagaga
cttgtgttgggactgcaggacatgatacaagcttacgaacgtgacacaggcacaaactac
ttcacaggaatgtctcagcataaaatacactcaagtgttacagatgctgaaactattgaa
gattctcatgtggaaaatatggaaattacagatcacgatgatcctccccgttccccttcc
tcaactgtagcagcccagaatggatttgcaagagtcatgggccttgaagattcagtttct
ttgacgacagaaaaagaaggcctggacagcggcttgggtgacgcgccaccgacttctgac
aaaaaaacaagcagccctacagaaaacttggaaccggaagtggtggaaaaggctacatca
gctcgcaaagctaaaagcaaaaagagatctggcaaattggaggacgcctcgttagtaatt
ccggacgactctgaaccccatcctttaagaaaatcctcaaggcagaagcagaaaaaggac
gtggaactggacaaaatcctcgaacagaaaaagaagaaaagtgtagagaaagtggccgag
tggctcatgaaagttccagccgaaggaagtttggagtttgagaaaccagatgacaacaaa
gacgactccgacagctgttcctcagcttcgacaatagatataaagcgacacaatagcgac
gtcacgtcaaagagagaagatcgcgccaaagctctggaggaccaggtgtttggagccgtc
tacaagagaaaagggagcaggacggtctctcctccgcttaacgcctttgtcaaaccggcg
attagacccgaaacacagacacgtgaaggtgtcgccggtaaaaaacaagaacaagagaaa
caaaacatgatagaagaagaagaaaacggcaccagcagtgacatttttaaagaagcagaa
ccgatggaggtcagggaggaaaatggaacaaatgtacagcaaaccaagaagaggacacgc
aacagtctgcagcaggttgacggtgatttgaaaggtcctgcacaatcagacgttgtggca
caaacaaaaacaaaaacagacaagaggaaaggtaaaaacgcaaagtcagaaaaaggcaaa
cctgcccgagcggcgaagcccctcgttctggtcggggttcaaagcgaagaaaccgttcct
gaaaccagaacgagaccagaagaagttcaagtgcagatcgagacttaccccagcagcgaa
gatcaggaaacactcgtcacaagaaccacccgaagaagtaagagagtcaagctatttcct
gagaaagctgaggagaagaaaacaaactcaagaaaaactggaaaagacaagaaggaaaat
actaatggtgacacaccggctaatagaaaccctcctaaaatcgacaatgcaacaaaggaa
gctaaaagaaacggatgcatatatgatcaggacttaggaggaattgaagacacagagtcc
ggtgaaaggaaatccaataaaaagtcaaaagaagccgttgaagagtccattacagaagtg
ccaaactgcgaaactgtgtccgaatctctttgttgtgcctctgttttaccgagctccgcg
agtcccggcgtgttgggtccaacgcttgaaagtgacaagccggtaaatcatctctcgagc
aacattcagccgcaaacctcagagaataaatgtgctgcagtggaaaaggaggaggacgac
agtgagctggacacggagctactactcaggagcttcagagccacgaaaaggaagtctttc
catctcggcaatgcagatgcgaaaaggagccgctgttcggacgaagacaacgtccctatc
cgtgaatcggaggaggacaattgtgactcgtcggcgaagaaggtttcttctagtgatgca
atctctccgtccaactcccccgtccagactagaaaagctgttttggaggaaccagatcga
gtcgcggccgaggcatcgattcccggtagcgcgtctccgaggaacagtcttagcagcgcg
ctcagtccgaacaaagtgtccgtgtgcaacgtggacaaccctcacgtttccatcatgcct
caagtggtggattctgggattcgcttcgtggccgtagaaaacgacgggttaaacgaagac
gctggcgccggcgtcacagctggacaagttctgatcccggagtcgtctttaacccccgag
gacctgctggctccaagtcttcacgaagcaaagacgagcagccactgcagcgacgaggcc
agcctcctgtcctccttcgacatcaagagaccgctgaggaagaagagaagagctcagagg
ctggagtcttcacccgagtccgatggcagcggatccaaagaggagctgccgactttggct
cagatctttggatcgtcggttgcccagcgagactcaaacgaaccggacaaagacgatgct
gcatgtgttacagaagaggcggtggagccacctgcaagtccaagccccgactgtatcagt
cccagccaagcttctgtggacttgttcgggactccggaggaatgtgaagttccacaaaat
gaggccttggaatcgtcccaattctcaagcgaagtccttgttacgcagcaaaagatagag
atgcagcaggagctggtgaggctggagaagctgatggctctggtttcggaggtgctccag
gagaaggaggccagtccttcgaaagacgcccccgcggagacacgtcagggctgcagagcc
acggacactcgcctcatgtgtgaccaggatctggaccaaagcgaaagcaggaaagacctt
ccagatgcaggacgagacccaaacacgcgaccctctgatggcaaacaggcgactgagccg
agcctggaaaagcacgttggcgcgaggatggcggaggaggagcactccacacacacgggc
ctgattgcaaaagaagaaaccttaaatgcaccttcggcgaccagaacgctgaacgaccgc
ggctccgtatcagacgggcaagaagacaaagagaacgacacccctccagaagagcggcgt
aaacccaaactggtgctcgcgtcgtccggattaagctccagtgaacagataatggtgaag
aagtttgccaagagagttggcgcccgtgtggtttccaaggtgaccgcggaggtaactcac
gtcgtcatgcacacagatgagcagctggtttgtgagcgtacgctgaaatacttcctgggc
atcgccggcaggaagtgggtggtgagcttccagtggatttctgagtgcttcaaacaaaag
aaactcttggatgagagtccatttgaggttagaggggatgtggtgaatgggcccaaccac
cagggcccctcgagggctcgtaccaccgaagacagcaacctgctcatgaggggctacacg
atctgcttccagggccctttcacagacatgaccacagatgacatggagtggatggtggag
ctctgcggagcagccgtggttaaagatccacttctcctggacggtcgacagaagtcccat
cagctgatcattgtgcagccgcggcctgagtcatcgacgtccacctacagcaatctctcc
agaaaagccacggtcgtgactcgcggttggctcctggacaccgtcgcgatgtacaccctc
caaaactacagcaactacacaacgtga
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integrated database retrieval system
