Mugil cephalus (flathead mullet): 125023273 Help Entry 125023273         CDS       T08342                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism mcep  Mugil cephalus (flathead mullet) Pathway mcep04115   p53 signaling pathway mcep04145   Phagosome mcep04148   Efferocytosis mcep04350   TGF-beta signaling pathway mcep04510   Focal adhesion mcep04512   ECM-receptor interaction mcep04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:mcep00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     125023273   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125023273  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     125023273    04148 Efferocytosis     125023273   09143 Cell growth and death    04115 p53 signaling pathway     125023273   09144 Cellular community - eukaryotes    04510 Focal adhesion     125023273   09142 Cell motility    04820 Cytoskeleton in muscle cells     125023273  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mcep04131]     125023273   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mcep00536]     125023273 Membrane trafficking [BR:mcep04131]  Endocytosis   Phagocytosis    Opsonins     125023273 Glycosaminoglycan binding proteins [BR:mcep00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125023273 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd EGF_3 EGF_CA EGF cEGF TSP1_ADAMTS TSP1_CFP_C Spectrin_SESTD1 TSP1_CCN Motif Other DBs NCBI-GeneID:  125023273 NCBI-ProteinID:  XP_047466385 LinkDB All DBs Position 17:9493947..9501756 Genome browser AA seq 1172 aa AA seqDB search MVLCGIFLLLMLWSCEGARLAESRDDNSVYDLFDLSGANKRQHGVSLVKGADPYSKAYKI LNADLIPPVPDSSFRDLLDSIQAERGFLLLVNLKQFKKTRGSILTIEKNDQSGPLLEIVS NGKANTLDVVYSTANQQQVVSIEDADLATGHWKNLTLFVQDDRAQLFVGCEEINARELDV PIQDVLSPEVADIARLRIGKGAMKDKFMGVLQNVRFVFGTTLDAVLRNKGCQSGATLTDV MTLDNPVNGSSPAIRTDYTGHKAKDLQSVCGFSCEDIASMFKELRGLNVVVRQLSNELQK VSRESTSLINQMNLHDRICIHNGIMHNDKDEWTVDGCTECTCQNGATVCRKISCPLIPCV NATVPDGECCPRCGTPSDYAEDGWSAWSDWTHCSVTCGRGIQQRGRSCDRINSKCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITQIRLCNSPTPQMGGRDCQGEG RHTKVCKKSPCPINGGWGPWSPWDTCSVTCGGGIQNRKRLCSDPAPKFGGKDCVGDATMS QICNKQECPIDGCLSNPCFSGAKCISFPDGSFKCGRCPLGYTGDGITCEDIDECKEVPDA CHTHNGIHRCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCTPRNPCQDGSHDCH KNANCVYLGVFSESMFRCECKPGYAGNGRICGEDTDLDGWPNTELLCVENATYHCKKDNC PSLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV FEANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQIDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQVDSDGDGRGDVCKDDFDQDNVLDIYDVCPENFDISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atggtgctgtgtggcatctttttgctgttgatgctttggagttgtgagggcgcacggctg gcagagagtcgggatgacaatagtgtgtatgacttattcgatctgagcggagcaaacaag agacaacacggagtgagtttggtcaaaggcgcagacccctacagcaaagcgtacaagatc ctgaacgcagacctgatccccccggtccccgacagctccttcagggacctcctcgactcc attcaggctgagcgaggcttcctcctcctcgtcaacttaaagcagttcaagaaaaccagg ggcagcattttaactattgagaagaacgaccagtccggaccccttctcgagatcgtttcc aacgggaaggcgaacaccctggatgtggtctactccaccgccaaccagcagcaggtcgtg tccatagaggacgcggacttggccacgggacactggaagaacctcacgttgttcgttcag gatgaccgggcgcaacttttcgtgggctgcgaggagatcaatgcgcgagagttggacgtg ccaatccaagacgtgctatcaccggaggtggcagacattgccagactgaggattggaaag ggagccatgaaggacaaatttatgggtgtacttcagaatgtgcgctttgtctttgggacc actcttgatgccgtactgagaaataagggatgtcaaagtggagctaccttaactgatgtc atgaccctggacaacccagtgaacggctccagccctgccattaggactgattacaccggc cacaaagccaaagacctgcaatctgtgtgtggcttctcctgcgaggacatcgccagcatg tttaaggagctcaggggactcaatgtggtcgttagacagctgtcgaatgagctccagaaa gtgtctagagaaagcacatccctgataaatcaaatgaacctccatgatcgaatctgcatc cacaatggcatcatgcacaacgacaaagatgaatggaccgtggacggctgcacagagtgc acttgccagaatggtgctactgtgtgtcgcaaaatctcctgccccttgatcccatgtgtt aatgccactgtgcctgatggagagtgctgccctcgctgcggaacaccaagcgactatgca gaggatggctggtccgcctggtctgactggacccattgttcagtgacttgcggccgtggc atccagcagcgtggacgctcctgcgaccgcatcaacagcaagtgtgaaggcacctctgtc cagacccgtgactgctacccgcaggaatgtgacaaacgcttcaaacaggatggaggctgg agccactggtcgccctggtcctcatgctctgtgacctgtggggagggagtcatcacccaa atccgactgtgtaactcccccactcctcagatgggtggcagggactgccagggagaggga cgtcacaccaaagtctgcaagaaatcaccctgtcctattaatggaggttggggaccttgg tcaccatgggacacctgcagcgttacctgtggtggaggaatccagaaccgcaaacgcctc tgctccgaccctgcccccaaatttggtggaaaggactgtgttggagacgctacaatgtct cagatttgcaacaaacaagaatgtcccattgatggttgtctctccaacccgtgcttctct ggtgccaagtgcatcagcttccctgatggctccttcaagtgtggtaggtgtccacttggc tacactggagacggcatcacctgcgaagacatcgatgaatgcaaagaggtccctgatgct tgccacactcataacggaatccatcgatgtgagaacactgagccaggttacaactgtctg ccctgccctgcacgtttctctggtcctcagccctttggaagaggagtggaacaagcaact gctaaaaaacaggtttgcactcctcgcaacccttgccaggatggtagccacgactgccat aaaaatgcaaactgtgtctacttgggcgtcttctccgagtccatgttccgctgtgagtgc aagccagggtatgccggcaacggccgcatttgcggagaggacacagacctggacggatgg cccaacactgaactgctgtgtgtggagaatgccacttaccactgcaaaaaggataactgc cccagccttcccaactctggtcaggaagaccatgacaaagatggccttggagatgaatgt gaccatgatgatgacaatgatgggatccccgatgacagggacaactgcccaagagtatac aaccctgcccagtacgatgcagaccgggatgatgttggtgaccgctgtgacaactgcgtg tttgaagctaataccgatcaaactgacaccgacaacaatggagagggtgacgcctgtgct gtggacattgatggcgatggtattctgaatgagaacgacaattgcccgtatgtctacaac gtggatcagagagacactgacagggatggtgtgggagatcactgtgataactgccctctg gagcacaaccctgatcagatcgactctgactcagatcgcataggagacaagtgtgacaac aatcaggacattgacgaggacggtcaccagaacaacttggacaactgcccctacatccct aatgccaaccaggcagaccacgacaaggatggcaagggtgacgcctgtgaccacgatgat gacaatgatggcatccctgatgacaaagacaattgtagactggcctttaaccccgatcag gtggactctgatggtgacggtcgtggtgatgtgtgcaaagacgattttgaccaagacaat gttctggacatttatgatgtgtgcccggagaactttgacatcagtgaaacagacttccgc agattccagatggttccgctagaccccaagggcacctctcagattgaccccaactgggtg gtccggcatcagggcaaagagttggtgcagactgtcaactgtgaccctggcattgcagtt ggttacgatgagttcagcgctgtggatttcagtggaaccttcttcatcaacacggacaga gatgacgactatgctgggttcgtttttggctaccagtccagctcccgcttctacacagtg atgtggaaacagatcacacagacctactggtcccacacacccacaagagctcaaggttac tctgggttgtcgatcaaagtggtcaactccaccacgggtcctggtgagcacctgaggaac gccctgtggcacactggagacaccgcaggacaggtgcgcactctgtggcacgaccccaag aacatcggctggaaagacttcactgcctacagatggcacctgacccacagacccaagact ggacttattagagtggttatgtatgaaggcaagagaatcatggccgattctggaaacatc tacgacaagacgtatgctggtgggcgactaggcttgtacgtcttctctcaggagatggtt tacttctcagatctcaaatacgaatgcagagacacataa

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