KEGG T02918: 101866667

Macaca fascicularis (crab-eating macaque): 101866667

Entry

101866667         CDS       T02918

Symbol

SMCHD1

Name

(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1

K23113

structural maintenance of chromosomes flexible hinge domain-containing protein 1

Organism

mcf Macaca fascicularis (crab-eating macaque)

Brite

KEGG Orthology (KO) [BR:mcf00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcf03036]
    101866667 (SMCHD1)
   03400 DNA repair and recombination proteins [BR:mcf03400]
    101866667 (SMCHD1)
Chromosome and associated proteins [BR:mcf03036]
Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101866667 (SMCHD1)
DNA repair and recombination proteins [BR:mcf03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     101866667 (SMCHD1)

SSDB

Motif

Pfam:

SMCHD1_S5 SMC_hinge HATPase_c_3 HATPase_c Big_1

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

18:join(71272629..71272814,71282071..71282146,71282784..71282945,71289656..71289738,71290399..71290529,71304330..71304444,71304564..71304683,71310760..71310926,71313587..71313677,71314373..71314583,71317092..71317212,71317289..71317472,71320206..71320400,71321492..71321605,71322143..71322249,71323321..71323403,71323561..71323674,71334513..71334590,71334670..71334789,71339294..71339438,71341664..71341760,71343220..71343292,71345221..71345360,71346043..71346177,71349358..71349585,71355823..71355971,71356859..71356947,71358085..71358203,71361129..71361296,71364883..71365008,71367378..71367457,71367703..71367860,71369086..71369201,71370627..71370691,71378789..71378876,71380245..71380376,71381771..71381923,71387463..71387589,71387754..71387873,71389682..71389767,71390409..71390531,71393845..71394035,71396259..71396368,71396627..71396697,71402869..71403040,71413986..71414144,71414451..71414565,71420487..71420511)

AA seq 2005 aa
MAAADGGGPGGASVGTKEDGGGVGHRTVYLFDRREKESELGDRSLQVGERSDYAGFRASV
CQTLGISPEENFVITTTSRKEITCDNFDETVKDGVTLYLLQSVNQLLLTATKERIDFLPH
YDTLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNIGVRRIQIKLLFDETQGKPAV
AVIDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGK
QAVFFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSVHITN
DDERFLHNLIIEEKEKDSFTAVVITGVQPEHIQYLKNYFHLWTRQLAHIYHYYIHGPKGN
EIRTSKEVEPFNNIDIEISMFEKGKVPKIVNLREIQDDMQTLYVNTAADSFEFKAHVEGD
GVVEGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDDDCFILEKAARGKRPIFECFWNGRL
IPYTSVEDFDWCTPPKKRGLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNT
LFTRILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGIITRPDLPSKKQGPWATYA
AIEWDGKIYKAGQLVKTIKTLPLFYGSIVRFFLYGDHDGEVYATGGEVQIAVEPQALYDE
VRTVPIAKLDRTVAEKAVKKYVEDEMARLPDRLSVTWPEGDELLPNEIRPAGTPIGALRI
EILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSSSGNKEIISHISQHGGKWPYWFKKME
NFQKLGNYTLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFSCVLLDHHCRVGVP
FNIPLEFQDEFGHTSQLVTDIQPVLEASGLSLHYEEITKGPNCVIRGVTAKGPVNSCQGK
NYNLKVTLPGLKEDSQILKMKLLPGQPRRLKVKPDSEILVIENGTAFPFQVEVLDESDNI
TAQPKLIVHCKFSGAPNLPVYVVDCSSSGTSILTGSAIQVQNIKKDQMLKARIEIPSCKD
VAPVEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDIMRNLIFQMYDEGERE
INITSALAEKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFT
VRPLPDEPKHLKCEMKGGKTVQIGQELQGEVVIIITDQYGNQIQAFSPSSLSSLSIAGVG
LDSSNLKTTFQENTQSISVRGIKFIPGPPGNKDLCFTWHEFSDFIRVQLISGPPAKLLLI
DWPELKECIPVINGRDLQNPIIVQLCDQWDNPAPVQHVKISLTKASNLKLTPSNQQHKTD
EKGRANLGVFSVFAPRGEHTLQVKAIYNKSIIEGPVIKLMILPDPEKPVRLNVKYDKDAS
FLAGGLFTDFMISVISEDDSIIKNINPARISMKMWKLSTSGNRPPANAETFSCNKIKDND
KEDGCFYFRDKVIPNKVGTYCIQFGFMMDKTNILNSEQVIVEVLPNQPVKLVPKIKPPTP
AVSNVRSVASRTLVRDLHLSITDDYNNHTGIDLVGTIIATIKGSNEEDTDTPLFIGKVRT
LEFPFVNGSAEIVSLVLAESSPGRDSTEYFIVFEPRLPLLSRTLEPYILPFMFYNDVKKQ
QQMAALTKEKDQLSQSIIMYKSLFEASQQLLNEMKCQVEEARLKEAQLRNELKIHNIDIP
TTQQVPHIEALLKRKLSEQEELKKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMV
ISWHLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRPLPHFRNGKLY
FKPIGDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLL
TRDGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLILGEQIDLLQQYRSAVCKVD
SVNKDLNSQLEYLRTPDMKKKKQELDEHEKNLKLIEEKLGMTPIRKCNDSLRHSPKVEMT
DCPIPPKRMRREATRQNRIITKTDV

NT seq 6018 nt +upstreamnt +downstreamnt
atggcagcggcggacggcggcgggcccggcggggcctctgtggggactaaggaggatggc
ggaggcgtcggccacaggacggtgtacttgtttgaccggcgcgaaaaggagtccgagctc
ggggaccggtctctgcaggttggggagcgctcggactacgcgggatttcgcgcctctgtg
tgtcagacacttggcatttcacctgaagaaaactttgttattacaacaacaagtaggaaa
gaaattacctgtgataattttgatgaaactgttaaagatggagtcaccttgtacctgcta
cagtcagtgaatcagttactactgacagctacgaaagaacgaattgacttcttacctcac
tatgacacactggttaaaagtggcatgtatgaatattatgccagtgaaggacaaaatcct
ttgccatttgctcttgcggaattaattgacaattcattgtctgctacttctcgtaacatt
ggggttagaagaatacagatcaaattgctttttgatgaaacacaaggaaaacctgctgtt
gcagtgatagataatggaagaggaatgacctctaaacagcttaacaactgggccgtgtat
aggttgtcaaaattcacaagacaaggtgactttgaaagtgatcattcaggatatgttcgt
ccagtaccagtgccacgcagtttaaatagtgatatttcctattttggtgttgggggcaag
caagctgtcttctttgtcggacaatcagccagaatgataagcaaacctgcagattcccaa
gatgttcatgagcttgtgctttctaaagaagattttgagaagaaggagaaaaataaagag
gcaatatatagtggatatattagaaacagaaagccctctgattctgttcacattacaaat
gatgatgaaagatttctacataatctcatcatagaggagaaggaaaaagatagctttact
gctgtggttatcacaggggtacaaccagaacacatacagtacttgaaaaattatttccac
ctttggacacgacagttagcgcatatttatcattactatattcatggcccaaaaggaaat
gaaatacgaacatcaaaagaagttgaacctttcaacaatattgatattgaaatttctatg
tttgaaaaagggaaggtacctaagattgtcaacctaagggaaatacaagacgacatgcag
acgttgtatgtaaacacagcagctgacagttttgaattcaaagctcatgttgaaggagat
ggtgtagtggaagggattatccgttatcatccattcttatatgatagagaaacctaccct
gatgatccatgctttccatcaaaattaaaagatgaagatgatgatgatgattgtttcata
cttgagaaagcagctagagggaaaaggcctatttttgaatgtttttggaatggacgatta
ataccatatacatcagttgaagactttgactggtgtactcctcctaagaagagagggctt
gcaccaattgaatgctacaatagaatatctggtgcattattcactaatgacaaattccag
gtcagcacaaataaactgacgtttatggatcttgagctaaaattgaaagataagaacacc
ctttttacaaggattttaaatggacaggaacagcggatgaaaattgacagagaatttgct
ttgtggctgaaggattgtcatgaaaagtatgataaacaaataaaatttacgctttttaag
ggaataattacacgtcctgatcttccttctaaaaagcaaggtccctgggcaacatatgca
gcaatagaatgggatggaaagatatacaaagcaggacagctggtcaagacaatcaagaca
cttcctctcttttatggaagcatagtaagattttttctttatggcgatcatgatggagaa
gtatatgctactggaggagaggttcaaattgcagtggaacctcaggcactatatgatgaa
gtaagaactgtgccaattgcaaagctggataggacagttgctgagaaagctgttaaaaaa
tatgtagaagatgaaatggcaaggctccctgatagattgtcagtaacttggcctgaagga
gatgaattattgcctaatgagattaggcctgctggaacccctattggtgcattaagaatt
gaaatattgaataaaaaaggggaagcaatgcaaaagcttccaggaacaagccacggaggg
tcaaaaaaactcctggttgagctcaaagttattttacattcttcaagtggaaataaagag
attatttcgcatattagtcaacatggaggaaaatggccttactggtttaaaaaaatggaa
aactttcagaagttggggaattataccttgaaattacaagttgtattgaatgaaagtaat
gcagacacttatgcaggaagaccgctaccatctaaagcaattaagttttctgttaaagag
ggtaagccagagaaattttcttgtgttcttctggatcatcattgtcgtgttggagttcca
tttaatatccctctggagtttcaggatgaatttggtcataccagtcaactagtaactgat
attcaaccagttcttgaagcaagtggtttatctttacattatgaagaaataaccaaagga
ccaaattgtgtaattcgaggtgttacagctaagggccctgtaaactcttgtcaaggcaag
aattataatctgaaggttactctgccgggcttaaaagaagactcacagattttgaaaatg
aaattactacctggtcagcctcgtcgattgaaagtgaaacctgattccgaaattttagtt
atagaaaatggaacagctttcccatttcaggtggaagttttagatgaatcagacaacata
acagcacaaccaaaattgattgttcattgtaagttttcaggtgctccaaaccttccagtc
tatgttgtagattgcagtagttccggaaccagtattttaacaggatctgcaattcaagtt
cagaatattaaaaaagaccagatgcttaaagcaagaattgaaatacctagttgtaaagat
gtggcacctgtggagaagactattaagttacttcccagtagccatgttgcaagactacaa
atattcagtgtggaaggacaaaaggcaattcagatcaaacatcaggatgaggttaattgg
atagcaggtgatattatgcgtaatcttatttttcaaatgtatgatgaaggagaaagagaa
atcaatataacatccgctttagcagaaaaaattaaagttaattggactcctgagattaac
aaagagcacttgctacagggtcttcttcctgatgtgcaagtaccaacatctgtaaaagat
atgcgctattgccaggtttctttccaagatgatcatgtgtctttggaaagtgcatttaca
gtaagaccacttcctgatgaacctaaacatctaaaatgtgagatgaaaggaggaaaaacc
gtacagattggccaagagcttcaaggagaagtagttataataattacggatcagtacgga
aatcagattcaagcattttcaccaagttctttatcttctttgtcaattgctggggttgga
cttgatagctcaaatttgaaaacaacctttcaggaaaacacacagagtataagtgtaaga
ggcatcaaatttattccaggtcctcctggaaataaggatctttgttttacttggcacgag
ttttctgactttattcgagtgcaactaatttctggacctcctgctaaacttcttcttata
gactggccagaactgaaggagtgcattccagtgattaatggaagagatttacagaaccct
attattgttcaactttgtgatcagtgggataatccagcaccggtacaacatgttaaaata
agtcttacaaaagctagcaatttaaagctcacgccttcaaaccaacagcataaaacagat
gagaaaggcagggctaatttgggagtattcagtgtttttgcccctagaggagagcatact
ctgcaggttaaagccatctataacaaaagtatcatagaaggacctgtaattaagttaatg
attcttccagatccagaaaaacccgttcgtctcaatgttaaatatgacaaagatgcttcc
ttcttagcagggggtcttttcactgattttatgattagtgttatttctgaagatgacagt
atcattaaaaatattaatccagcacgtatttccatgaaaatgtggaagctatctaccagt
gggaaccgacccccagcaaatgcagaaacatttagttgtaataaaataaaagataatgac
aaggaagatggctgcttctatttcagggataaagtaattcctaataaagtggggacatat
tgtatccagtttggttttatgatggataaaacaaatattctcaacagtgaacaggttata
gttgaagtcctgcctaatcaacctgtgaagttagtacctaaaattaaaccacctacacca
gctgtttctaatgttcgctcagttgccagtaggaccttggtcagagatctacatcttagt
atcacggatgactacaacaaccatactggaattgatttggttggcactataatagccacc
attaaaggctctaatgaggaagatactgataccccactgtttatcgggaaagttagaaca
cttgaattcccctttgtgaatggttcagctgaaatcgtgagtctggtgctggcagaaagt
agtcctggaagggatagtactgaatattttattgtatttgagccccggctaccactttta
tcaagaaccttagaaccatatatcctaccattcatgttttacaatgatgttaagaagcag
caacaaatggcagcacttacaaaagaaaaggaccaattatctcagtctattattatgtat
aaaagtttatttgaagccagccaacagcttcttaatgaaatgaaatgtcaagttgaagaa
gcaagattaaaagaggcccaattgcgaaatgaactaaaaatacataatattgacattcct
acaacacaacaggtgccacacattgaagcgcttctgaaaagaaagctatcagaacaggaa
gaactgaagaaaaaacctagaagatcatgtactcttccaaactatactaaaggcagtggg
gatgttttgggaaagattgcacatctagcacaaattgaagatgatagagctgcgatggtt
atttcttggcatctggcaagtgacatggactgtgtagtcaccctaaccactgatgctgca
cgtcgtatctatgatgaaacccaaggtcgtcagcaggtgttgccccttgattctatttat
aagaagactcttccagattggaaaagacctctacctcatttccgaaatggaaaattgtat
tttaaacccattggagatccagtctttgctcgagacttgttaacatttccagataatgta
gaacattgtgaaacagtatttggtatgctgttaggagacaccattattttggataatctg
gatgcagccaatcattatagaaaagaggttgttaaaattacacactgtcctacactgctg
accagagatggagatcgaattcgaagtaatggaaagtttgggggccttcagaataaagct
cctccaatggataaacttcggggaatggtatttggagctccagtaccaaaacagtgtctg
atcttaggggaacaaatagatcttcttcagcagtatcgttctgctgtgtgcaaagtagac
agtgtgaataaggatcttaacagtcaattagagtaccttcgcactccggatatgaagaag
aaaaagcaagaacttgatgaacatgagaaaaatctcaaactaatagaggagaaactaggt
atgactcccatacgtaagtgtaatgactcattgcgtcattcaccaaaggttgagatgaca
gattgtccaattcctcctaaaagaatgagacgagaagctacaagacaaaataggattata
accaaaacagatgtgtga

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