KEGG   Macaca fascicularis (crab-eating macaque): 102125851
Entry
102125851         CDS       T02918                                 
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    102125851 (KDM2B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mcf03000]
    102125851 (KDM2B)
   04121 Ubiquitin system [BR:mcf04121]
    102125851 (KDM2B)
   03036 Chromosome and associated proteins [BR:mcf03036]
    102125851 (KDM2B)
Enzymes [BR:mcf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     102125851 (KDM2B)
Transcription factors [BR:mcf03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    102125851 (KDM2B)
Ubiquitin system [BR:mcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     102125851 (KDM2B)
Chromosome and associated proteins [BR:mcf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102125851 (KDM2B)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     102125851 (KDM2B)
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box Cupin_8 JmjC AppA_SCHIC
Other DBs
NCBI-GeneID: 102125851
NCBI-ProteinID: XP_065380992
Ensembl: ENSMFAG00000037613
LinkDB
Position
11:complement(join(128518627..128518808,128529649..128529867,128530592..128530753,128530847..128531010,128531944..128532623,128532778..128532816,128533462..128533575,128533791..128534059,128534228..128534315,128535054..128535197,128542886..128543110,128583954..128584040,128600478..128600950,128604400..128604526,128612890..128613005,128624027..128624180,128625769..128625862,128640367..128640469,128640951..128641133,128667104..128667150,128668355..128668433,128671375..128671771))
AA seq 1381 aa
MSLQWLPKTPGGVPRVERSWTPGVRAPLLVLLFSIFGNCAKLLGLQWWGAGGARLLHLLV
LAQVERRPPAPPVMSRALWFGSSQRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQL
YQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLV
DVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDW
VDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGG
KIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYT
PVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRS
HLTQEYQRESMLIDAPRKPSIDGFSSDSWLEMEEEACDQQPQEEEEKDEEGEGRDRAPKP
PTDGSASPTSMPSEDQEALGKKPKAPALRFLKRTLSNESEESVKSTTLPVDYPKTPTGSP
ATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADD
DPSLAITGVPVVTWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEA
CLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEE
GKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKAYKQKRGP
GFKYASNLPGSLLKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPPDGLLRRKS
DDVHLRKKRKYEKPQELSGRKRASSLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQ
LKPGKEDKLFRKKRRSWKNAEDRMALANKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSP
TAGPSTEGTEGPEEKKKVKMRRKRRLPNKELSRELSKELNHEIQRTESSLANENQQPIKS
EPESEGEEPKRPPGVCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKC
IQMERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRW
CCDKRLWTRIDLNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLV
LSGCSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNI
VELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINL
SDCNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKL
S
NT seq 4146 nt   +upstreamnt  +downstreamnt
atgtcccttcaatggcttccaaagacaccggggggagtaccccgtgtggagcgcagctgg
acccccggggtgcgggcccctctccttgtcctgcttttcagcatctttggcaattgcgca
aagttgcttgggttgcaatggtggggtgcagggggcgcgcggctgctgcacctgttagtg
ctggcccaggttgagaggcgacctccagcccccccagtaatgtcccgggctctctggttt
gggtcctcgcagcgcccgattgaccgccagcgatacgacgagaacgaggacttgtcggac
gtggaggagatcgtcagcgtccgcggcttcagcctggaggagaagcttcgcagccagctg
taccaaggggacttcgtgcatgccatggagggcaaagatttcaactatgagtacgtacag
agagaagctctcagggttcccctgatatttcgagaaaaggatggactgggaattaagatg
cctgaccctgatttcacagtccgagacgtcaaactcctagtggggagtcggcggcttgtg
gacgtgatggatgtgaacacccagaagggcacagagatgagcatgtcccagtttgtgcgt
tactacgagacgcctgaggcccagcgggacaagctgtacaacgtcatcagcctagagttc
agccacaccaagctggagcacttggtcaagcgtccgactgtggtagacctggtggactgg
gtggacaacatgtggccccagcatctgaaggagaagcagacagaagccacgaatgccatt
gcagagatgaagtatccgaaagtgaagaagtactgtctgatgagcgtgaaaggttgtttc
accgacttccacatcgactttggaggcacttccgtttggtaccatgttttccggggtggg
aagattttttggctgattcctccaacgctgcacaatttggcgctgtacgaggagtgggtg
ctgtcaggcaaacagagtgacatctttctgggagaccgtgtggaacgatgccaaagaatt
gagctgaagcagggctacacatttttcatcccttccggttggatccatgccgtctacacc
cctgtagactctttggtattcggcggaaacatcctgcacagctttaacgtgcccatgcag
ctgcggatctacgagatcgaggacaggacgcgggtgcagcccaaattccgttaccccttc
tactatgagatgtgctggtatgtcctggagagatacgtgtactgtgtgacccagcgctcc
cacctcactcaggaataccagagggagtcgatgcttattgatgccccgaggaagcccagc
atagacggcttctcttcggattcctggctggagatggaggaggaggcctgtgatcagcag
cctcaggaggaggaggagaaggacgaggagggcgagggcagggacagggcacccaaaccg
cccaccgatggctccgcttcacccaccagcatgccctccgaggaccaggaggcccttggg
aagaagcccaaagcacctgccctgcggttcctcaaaaggactttgtctaacgagtcagag
gagagcgtgaagtccaccacgttgcccgtagactaccccaagacccccactggctctccc
gccacggaggtctctgctaaatggacccatctcaccgagtttgaactgaagggcctgaaa
gctctggtggagaaactggaatccctcccggagaacaagaagtgtgtccccgagggcatc
gaggacccccaggcactcctggagggtgtgaagaatgtcctgaaggagcacgcggatgat
gaccctagtctggccatcactggggtccctgtggtgacttggccaaagaagactccaaag
aaccgggctgtgggtcggcccaaggggaagctgggcccggcctccgcggtgaagttggcc
gccaaccggacaacggcaggagctcggcggcgccggacgcgatgccgcaagtgcgaggcc
tgcctgcggaccgagtgcggagagtgccacttctgcaaggacatgaagaagttcgggggc
cccgggcgcatgaagcagagctgcatcatgcggcagtgcatcgcgccagtgctcccccac
accgccgtgtgccttgtgtgtggcgaggcggggaaggaagacacagtggaagaggaggaa
ggcaagtttaacctcatgctcatggagtgctccatctgcaacgaaatcatccaccccgga
tgccttaagattaaggagtcagagggtgtggtcaacgacgagcttccaaactgctgggag
tgtccgaagtgtaaccacgccggcaagaccgggaaagcctacaagcaaaagcgtggccct
ggctttaagtacgcctccaacctgcccggctccctgctcaaggagcagaagatgaaccgg
gacaacaaggaagggcaggaacctgccaagcggaggagcgaatgtgaggaggcaccccgg
cgcaggtcggacgagcaccccaagaaggtgccgccggacggcctcctgcgcagaaagtct
gatgacgtgcacctgaggaagaagcggaaatacgagaagccccaggagctgagtggacgc
aagcgggcctcatcgcttcaaacgtcccccggttcctcctctcacctctcgccgaggccc
cctctaggcagcagcctcagcccctggtggagatccagtctcacttacttccagcagcag
ctcaaacctggcaaagaagataagcttttcaggaaaaagcgtcggtcctggaagaacgcc
gaggaccgcatggcgctggccaacaagcccctccggcgcttcaagcaggaacccgaggac
gatctgcccgaggcacccccaaagaccagggagagcgaccactcccgctccagctccccc
accgcaggacccagcaccgaggggaccgagggcccggaggagaagaagaaggtgaagatg
cgccggaagcggcggcttcccaacaaggagctgagcagggagctgagcaaggagctcaac
cacgagatccagaggacggagagcagcctggccaacgagaaccagcagcccatcaagtcg
gagcctgagagtgagggcgaggagcccaagcggcccccaggcgtctgcgagcgtccccac
cgcttcagcaaggggctcaacggcacccctcgggagctgcggcaccagctgggacccggc
ctgcgcagcccgccccgtgtcatctcccggcccccaccctccgtgtccccgcccaagtgt
atccagatggagcgccatgtgatccggccaccccccatcagccccccgcctgactcgcta
cccctggacgatggggcagcccacgtcatgcacagggaggtgtggatggccgtcttcagc
tacctcagccaccaagacctgtgtgtctgcatgcgggtctgcaggacctggaaccgctgg
tgctgcgataagcggttgtggacccgcattgacctgaaccactgcaagtctatcacaccc
ctgatgctgagtggcatcatccggcgacagcctgtctccctcgacctcagctggaccaat
atctccaagaagcagctgagctggctcatcaaccggctgcctgggctccgggacttggtg
ctgtcaggctgctcatggatcgcggtctcagccctttgcagctccagttgtccgctgctc
cggactctggatgtccagtgggtggaaggactaaaggatgcccagatgcgggatctcctg
tccccgcccacagacaacaggccaggtcagatggacaatcggagcaagctccggaacatc
gtggagctgcgcctggcaggcctggacatcacagatgcctccctgcggctcatcatccgc
cacatgcccctgctctccaagctccacctcagttactgtaaccacgtcaccgaccagtcc
atcaacctgctcaccgctgttggcaccaccacccgagactccttaaccgagatcaacctg
tctgactgcaataaggtcactgatcagtgcctgtccttcttcaaacgctgtggaaacatc
tgtcacattgacctgaggtactgcaagcaagtcaccaaggaaggctgtgagcagttcata
gccgagatgtctgtgagtgtccagtttgggcaagtagaagaaaaactcctgcaaaaactg
agttag

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