Macaca fascicularis (crab-eating macaque): 102126615
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Entry
102126615 CDS
T02918
Symbol
APOBEC3B
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf03250
Viral life cycle - HIV-1
mcf05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102126615 (APOBEC3B)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102126615 (APOBEC3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcf03019
]
102126615 (APOBEC3B)
Messenger RNA biogenesis [BR:
mcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102126615 (APOBEC3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC_C
APOBEC3
APOBEC4_like
APOBEC4
APOBEC1
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
102126615
NCBI-ProteinID:
XP_005567303
Ensembl:
ENSMFAG00000008980
LinkDB
All DBs
Position
10:complement(join(12674730..12674744,12675022..12675137,12675554..12675848,12676439..12676592,12681152..12681266,12681474..12681723))
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AA seq
314 aa
AA seq
DB search
MCFLSRFCGNQLPAYKRFQITWFVSWNPCPDCVAKVIEFLAEHPNVTLTISTARLYYYWG
RDWQRALCRLRQAGARVKIMDYEEFAYCWENFVYNEDQSFMPWYKFNDNYAFLHRMLKEI
LRHLMDPDTFTSNFNNDLSVLGRHQTYLCYEVERLDNGTWVPMDQHWGFLCNQAKNVLRG
DYGCHAELCFLGWVPSWQLDPAQTYRVTWFISWSPCVSWGCAEQVRAFLQENTHVRLHIF
AARIYDYDPLYQEALRTLRDAGAQVSIMTYDEFEYCWDTFVDRQGRPFQPWDGLDEHSQA
LSERLRAILQNQGN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcctctctcggttctgtggcaaccagctgcctgcttacaagcgcttccagatc
acctggtttgtatcctggaacccctgcccggactgtgtggcgaaggtgattgaattcctg
gctgagcaccctaatgtcaccctgaccatctctaccgcccgcctctactactactggggt
agagattggcagagggcgctctgcaggctgcgtcaggcaggggcccgagtgaagatcatg
gactatgaagaatttgcatactgctgggaaaactttgtgtacaatgaagatcagtcattc
atgccttggtacaaattcaatgacaattatgcattcctgcaccgcatgctaaaggagatt
ctcagacacttgatggatccagacacgttcacttccaactttaacaatgacctttcggtc
cttggacggcaccagacctacttgtgctacgaggtggagcgcctggacaatggcacctgg
gtcccaatggaccagcactggggatttctatgcaaccaggctaagaatgttctccgtggt
gattatggctgccacgcggagctgtgcttcctgggctgggttccttcttggcagttggac
ccggcccagacgtacagggtcacttggttcatctcctggagcccctgcgtcagctggggc
tgtgccgaacaagtgcgtgcgttccttcaggagaacacacacgtgagactgcacatcttc
gctgcccgcatctatgattatgaccccctgtatcaggaggcactgcgaacgctgcgggat
gctggggcccaagtctccatcatgacctatgatgaatttgagtactgctgggacaccttt
gtggaccgccagggacgtcccttccagccctgggatggactagatgagcacagccaagcc
ctgagtgagaggcttcgggccattctccagaatcagggaaactga
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integrated database retrieval system
