Macaca fascicularis (crab-eating macaque): 107126386
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Entry
107126386 CDS
T02918
Symbol
APOBEC3F
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F isoform X5
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf03250
Viral life cycle - HIV-1
mcf05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107126386 (APOBEC3F)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
107126386 (APOBEC3F)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcf03019
]
107126386 (APOBEC3F)
Messenger RNA biogenesis [BR:
mcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107126386 (APOBEC3F)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC3
APOBEC_C
APOBEC4_like
APOBEC4
APOBEC1
AID
dCMP_cyt_deam_1
Toxin-deaminase
DUF7136
Motif
Other DBs
NCBI-GeneID:
107126386
NCBI-ProteinID:
XP_005567310
Ensembl:
ENSMFAG00000004037
LinkDB
All DBs
Position
10:complement(join(12614100..12614218,12614442..12614721,12617295..12617451,12621478..12621592,12621800..12622079,12623955..12624108,12626086..12626102))
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AA seq
373 aa
AA seq
DB search
MKPQFRNTVERMYRGTFFYNFNNRPILSRRNTVWLCYEVKTRGPSVPTWGTKIFRGQVYS
KPEHHAEMCFLSRFCGNQLPAYKRFQITWFVSWTPCPDCVAKVAEFLAEHPNVTLTISAA
RLYYYWETDYRRALCRLRQAGARVKIMDYEEFAYCWENFVYNEGQSFMPWDKFDDNYAFL
HHKLKEILRNPMEATYPHIFYFHFKNLRKAYGRNETWLCFTMEIIKQHSTVSWETGIFRN
QVDPESRCHAERCFLSWFCEDILSPNTDYRVTWYTSWSPCLDCAGEVAEFLARHSNVKLA
IFAARLYYFWDTHYQQGLRSLSEKGASVEIMGYKDFKYCWENFVYNGDEPFKPWKGLKYN
FLFLDSKLQEILE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctcagttcagaaacacagtggagcgaatgtatcgaggcacattcttctacaac
tttaataacagacccatcctttctcgtcggaataccgtctggctgtgctacgaagtgaaa
acaaggggcccctcagtgcccacttggggcacaaagatctttcgaggccaggtgtattcc
aagcctgagcaccacgcagaaatgtgcttcctctctcggttctgtggcaaccagctgcct
gcttacaagcgcttccagatcacctggtttgtatcctggaccccctgcccagactgtgtg
gcgaaggtggccgaattcctagctgagcaccctaatgtcaccctgaccatctctgccgcc
cgcctctactactactgggaaacagattatcgcagggcgctctgcaggctgcgtcaggca
ggggcccgagtgaagatcatggactatgaagaatttgcatactgctgggaaaactttgtg
tacaatgaaggtcagtcattcatgccttgggacaaattcgatgacaattatgcattcctg
caccacaagctaaaggagattctcagaaacccgatggaggcaacgtatccacacatattc
tacttccactttaaaaacctacggaaagcctatggtcggaatgaaacctggctgtgcttc
accatggaaattataaagcagcactcaactgtctcctgggagacgggcatcttccgaaac
caggtcgatcctgagagccgttgtcatgcagaaaggtgcttcctctcctggttctgcgag
gacatactgtctcctaacacagactaccgggtcacctggtacacatcttggagcccttgc
ctagattgtgcaggggaggtggccgagttcctggccaggcacagtaatgtgaagctcgcc
atctttgccgcccgcctctactacttctgggatacacattaccagcaggggctccgcagc
ctgagtgagaaaggggcctccgtggagatcatgggctacaaagattttaaatattgttgg
gaaaactttgtgtacaatggtgatgagccgttcaagccttggaagggactaaaatacaac
tttctattcctggacagcaagctgcaggagattctcgagtga
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integrated database retrieval system
