Methyloceanibacter caenitepidi: GL4_1587 Help Entry GL4_1587          CDS       T03636                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism mcg  Methyloceanibacter caenitepidi Pathway mcg03030   DNA replication mcg03410   Base excision repair mcg03420   Nucleotide excision repair mcg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mcg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     GL4_1587    03410 Base excision repair     GL4_1587    03420 Nucleotide excision repair     GL4_1587    03430 Mismatch repair     GL4_1587  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mcg03032]     GL4_1587    03400 DNA repair and recombination proteins [BR:mcg03400]     GL4_1587 Enzymes [BR:mcg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      GL4_1587 DNA replication proteins [BR:mcg03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      GL4_1587 DNA repair and recombination proteins [BR:mcg03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      GL4_1587    NER (nucleotide excision repair)     GGR (global genome repair) factors      GL4_1587    MMR (mismatch excision repair)     DNA ligase      GL4_1587   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       GL4_1587 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia PTCB-BRCT FdhE_central Motif Other DBs NCBI-ProteinID:  BAQ17042 UniProt:  A0A0A8K3C2 LinkDB All DBs Position 1642664..1644823 Genome browser AA seq 719 aa AA seqDB search MAKKTATKPTKKSATQDELAEKPVEELTEDEAASELARLAAEIAHHDALYYQKDDPEVSD ADYDALRLRNEAIEARFPGLIREDSPAKRVGAAPADGFAKVTHAVPMLSLGNVFDDDGVR EFVDRIRRFLGLDADVALAFTTEPKIDGLSIGLRYEGGRLVQAATRGDGYVGENVTANVL TIGDIPKQVKARDFPDPFEVRGEIYMSHSAFAALNAEQEKAGAKIFANPRNAAAGSLRQL DSSVTASRPLQFFAYAWGEAASLPADTQWGVYEAFAKWGFPLNPLATLTDSLDEMLGIYR EIEEGRAGLDYDIDGVVYKLDRLDLQQRLGFVSRSPRWAIAHKFPAQKATTILRDIEIQV GRTGALTPVAKLEPVTVGGVVVQNATLHNEDEIARKDVRIGDTVILQRAGDVIPQILGPV LDKRPKSAKPFKFPTVCPACGSHAVREINPNTGKEDAVRRCTGGLICPAQRVERLKHFVS RNAFDIEGLGEKNIQAFYDEGLIQSPPDIFTLAARDAKAEEKLESREGWGPTSAQKLFDA IAARRNVSLDRFIYALGIRHVGEITGRLLARSYGTIDNFLKAMGEAAKDRDGDAFKDLDN IDGIGPTAASAIADFFGEPHNTEVIHDLLEEVKPKPLEAVDNASAVSGKTVVFTGTLEHM TRAEAKAQAERLGAKVAGSVSKNTDYVVAGPGAGSKLKNAKDLGVDVLTEGEWLKLIDQ NT seq 2160 nt NT seq  +upstreamnt  +downstreamnt atggccaagaagaccgcgacgaagcccacgaagaagtccgcgacgcaggacgaacttgcc gaaaagccggtcgaggagctgaccgaagacgaggcggccagcgaactggcgcggcttgca gccgagatcgcccatcacgatgcgctatattaccagaaggacgatccggaagtttccgat gcggactacgatgccctgcgcctccgtaacgaggccatcgaagcgcggtttcccggcctc atccgcgaagacagtccggcaaagcgagtcggcgccgcgccggccgacggctttgccaag gtcacccatgcggtgccgatgctgtcgctcggcaacgtgttcgacgatgacggcgtacgc gagttcgtggatcgcatccggcggttcctcggcctcgatgcggacgtggcgttggccttc accaccgagcccaagatcgacggtttgtcgattgggctgcgctacgaaggcggccgcttg gtgcaggcggccacgcgaggcgatggttatgtgggcgagaacgtcacggccaacgtcctg accatcggtgatatccccaagcaggtcaaagcgcgcgacttccccgatccgttcgaagtg cggggcgaaatctacatgagccacagcgcattcgccgcgctgaatgcggagcaggaaaag gcgggggccaagatcttcgccaatccgcgcaacgccgcggccgggtcgttgcgtcagctg gattccagcgtgacggcgtcgcggcccctccagttcttcgcctacgcctggggcgaggct gcgagcctgccggccgacacccaatggggcgtctacgaggccttcgccaaatggggcttt ccgctcaatccgctggcgacgctcacggactcgctcgacgagatgctcggcatctatcgc gaaatcgaggagggcagggccggcctcgactacgatatcgacggcgtcgtctacaagctc gaccggctcgacctgcagcaacgtctcggcttcgtttcgcgctcgccgcgctgggccatt gcgcacaagtttccggcccaaaaggccaccaccatcctgcgcgacatcgagatccaggtg ggccgcaccggcgcactgacccccgtcgccaagctggagccggtgacggttggcggcgtc gtggtccagaacgccacgctgcacaacgaagacgagatcgcgcgcaaagacgtccgcatc ggcgacacggtaatcctgcagcgggcgggcgacgtgatcccgcaaattctcgggcccgtt ctcgacaaacggcccaagagcgccaagcccttcaagtttccgactgtgtgccccgcctgc ggcagccacgctgtgcgggagatcaatcccaacacggggaaggaagacgcggtgcgccgc tgtacaggcggcttgatctgccccgcgcagcgcgtcgaaaggctgaagcacttcgtctcg cgcaatgcgttcgacatcgagggactgggcgagaagaacattcaggcgttctacgatgag ggcctcattcaatcgccgccggacatttttacactggcagcccgcgacgccaaggcagag gagaagctcgagagccgcgaaggctgggggccgacctccgcgcaaaaactgttcgatgcc atcgcggcgcggcgcaacgtgtccctcgaccggttcatctacgcgctcggcatccgccac gtcggcgagatcacgggccggctgcttgcgcgcagctacggcacaatcgacaacttcctt aaggccatgggcgaagctgccaaggaccgcgacggcgacgccttcaaggatctcgataat atcgacggcatcggcccgacggccgcatccgccatcgccgacttcttcggcgagccgcac aacaccgaagtaatccacgacctgctcgaggaggtgaagccgaaaccgctcgaagccgtc gacaacgcctcggcggtatcgggcaagacggttgtcttcacgggtacgctcgaacacatg acgcgggcggaagccaaggcccaggccgaacgcctaggcgccaaggtcgcgggctccgta tcgaaaaacaccgactatgtggtggcgggtccgggcgccggctcgaagctcaagaacgcg aaggacctcggcgtggacgttttgaccgagggcgagtggctgaagcttattgatcagtag

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