Momordica charantia (bitter melon): 111013023
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Entry
111013023 CDS
T05045
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111013023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111013023
Spliceosome [BR:
mcha03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111013023
Complex C
U5 SnRNP specific factors
111013023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
EF-G_D2
SOI
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
111013023
NCBI-ProteinID:
XP_022143036
UniProt:
A0A6J1CP01
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MDDSLYDEFGNYIGPEIESDKDSDIEDEDEDLMEKPDKDEGASDGEDVIGASNGWITTSN
DVGMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
RTYVSNQFLVGLMSNPSLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEVINNH
ITAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADRFASRLWG
DYYYHSDSRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN
AAYKLNVRPLLRLACSSVFGGASGFTDMLVKHIPSPRDASSRKVDQIYTGPKDSVIYKAM
KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQAVRVLGEGYSPEDEEDMTIK
EVTKLWLYQARDRVPVAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
RLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPSYIVKAFLPVIESFGFET
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
DVSINKFFDEAMMVELAQQAADLHQQMM
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagcttgtatgatgaatttggaaactacataggaccagaaattgagtcggac
aaggatagtgacatagaagatgaagatgaagaccttatggagaagcctgacaaagatgaa
ggtgcatcagatggtgaagatgtaattggtgcttcaaatggttggattacaacgtctaat
gatgttggtatggacaaccagattgtccttgctgaggacaaaaagtattatccaactgca
gaagaggtttatggcgatgatgttgaaacattggttatggatgaagatgaactacctcta
gaacaaccaattattaagcctgttagaaatataaagtttgaggttggggtgaaagattct
aggacgtatgtttcaaaccaatttctggtaggtctcatgtccaatccatctttggtccgc
aacgttgcacttgtaggccacttgcatcatggaaagactgtcttcatggatatgttggtc
gagcaaacacatcacatgtcaacattcgatattaaaggagagaaacatctgaggtacacg
gatacgaggattgatgagcaggagagaggaatatcgattaaggcagttcctatgtcacta
gtgctcgaggatggcaattcgaaatcatacctttgcaatataatggacacccctggccat
acaaatttttctgatgaaatgactgctgctcttaggcttgctgatggtgcagtattgatt
gtagatgctgctgagggagtaatggtcaatacagagagggctatacgccatgcaattcaa
gagcgattgcccattgttgttgtaattaataaggttgacaggttgattacagagctcaaa
ttgcccccaagggatgcttactataaattaaggcatacgctagaggttattaataaccat
ataactgctgcttcgtctactgctggaaatgtccaagttatcgacccagcagctggaaat
gtgtgttttgcaagtgctacagcaggatggtcgtttactttgcaatcatttgcaaaatta
tatgtgaaactccatggaatcccatttgatgctgataggtttgcatctcgtctttgggga
gattattattatcattctgatagccgaggttttaagaaaaaacagcctgcaagtggaggg
gaaaggtcatttgtccaatttgtactagagccgctatacaaaatatatagtcaggttatt
ggcgaacataggaaaagtgttgagacaactcttgcagagcttggcgttactcttagcaat
gcagcttacaagttgaatgtcaggccattgctgagactggcttgtagttcagttttcggt
ggagcttcaggattcactgacatgcttgttaagcacataccttctcccagagatgcttct
tctcggaaggttgatcaaatttatactgggcctaaagactctgtgatttacaaagcaatg
aaagagtgtgatccttctgggcctttaatggtgaatgtgactaaactgtatcccaagtca
gactgcagtgtttttgatgcgtttggaagggtttatagtggtaagattcaaacaggacag
gcggtacgggtgttgggtgaaggctattcaccagaggatgaggaagatatgaccataaag
gaagtgacaaaactatggctttaccaagctcgagacagggttcccgttgcggaggctcct
ccgggatcttgggttctcattgaaggagtggatgcatctattatgaaaactgcaactctg
tctaatgtagattatgatgaggatgtctacattttccgaccacttcaattcaatactctt
ccagtggtgaaaacagctacagagcctctaaatccaagtgagttaccaaagatggtggag
ggtcttcggaagatcagcaaaagctatcctctggcaatcaccaaagttgaggaatctggt
gagcataccattttaggtactggagagctgtacttggattcaattatgaaggatcttaga
gagctctattctgaagtagaagtcaaggtagccgatcctgttgtctcattttgtgaaaca
gttgtagagtcttcctcaatgaaatgctttgctgagactcctaacaagaagaataaaata
accatgattgccgagccattggagagaggtcttgctgaagacattgagaatggtgtagta
agccttgattggtctagaaagaaactcggagatttcttccagacaaagtatgagtgggat
ttgcttgctgcaagatccatatgggcatttggcccagataagcagggacctaacattcta
ttagatgacacactctcttctgaggtagacaagaatttgttgaatgccgtcaaggattcc
atcgtccaagggtttcaatggggtgctagagaaggaccactttgtgatgaacccattaga
aatgtaaagttcaaaattgtagatgcaagaattgcacctgagccattgcatcgtgggtct
ggtcagatcattcccacagctcgacgtgtggcctattcatcttttcttatggcaacccca
cggcttatggaaccagtatactacatcgagatacaaacaccgattgattgtgtctctgca
atctatactgtcctatctcgaaggcgtggacatgttactgctgatgttgctcaaccaggg
actccatcttacatcgtcaaggcatttttacctgttatagaatcttttggctttgagacg
gacttgcggtatcatacgcaaggccaagctttctgtctctctgtgtttgaccattgggcc
atcgttcctggtgatccacttgacaagagcattgttttacggcctctcgagccagcaccg
attcaacatcttgctcgtgaattcatggtgaagacaaggcgtagaaagggaatgagcgag
gatgtaagcataaacaaattcttcgacgaggccatgatggttgagttggctcagcaagcg
gccgatcttcatcaacaaatgatgtaa
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