KEGG   Momordica charantia (bitter melon): 111022290
Entry
111022290         CDS       T05045                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111022290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcha03041]
    111022290
Spliceosome [BR:mcha03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111022290
 Complex B
    111022290
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    111022290
SSDB
Motif
Pfam: SMN_Tudor TUDOR Agenet CHASE3
Other DBs
NCBI-GeneID: 111022290
NCBI-ProteinID: XP_022155149
UniProt: A0A6J1DPE2
LinkDB
Position
Unknown
AA seq 299 aa
MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA
KQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQAVWSEDGEWYDA
TIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQAA
SVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD
NT seq 900 nt   +upstreamnt  +downstreamnt
atgcaaggaggagaagacgtaagcatcgaagagttggcttctaatctctctacctacaaa
gaccagcttcagcaggtcagacagctattagatgatgatcccagcaactctgaatacatt
gatatggaaaaggagcttgaagaggttatctctctgacggaagaactacttgcaacagca
aagcaaaatgagatttctggatcaaacgtagaaactggtgacaacagtgcatcaataagt
ttcctgcagtctaaagaaactaagatggaagctgaaagcctgtccgatcatcatgagaaa
tttcctattggatcaaaagttcaagctgtttggagtgaggatggggaatggtatgatgct
acgattgaagcccatactgtaaatggtttctatgtttcttatgatagttgggggaacaaa
gaagaggtggaccctgccaatgtaagggaaatccaacaggaagttaatgctttacttgaa
gcagaaagaatggctgaagctacgaagcaggctatcaagcgcaagattgcgcaagctgct
tctgttgacttccaatcacgaaatttaccaccaaagcttcgtattgaacctgacgatcct
gaggatgttaaagccaccaaacgcaagaaaatacatgctttcaagtcaaagatgcgcata
gaacagcttgaagttacccaaaataaacggcagaatgcttggcagcagtttcagtcagca
aaaggcaagtctaaaaagattggtttcttctcggggcgcaagagggagagcattttcaag
tctccggatgatccgaatggaaaggttggcgtgactggaagtggtaagggtttgactgag
tttcagaagagggaaaagcacttgcatcttaaaggtgcaacggtggagatggatgattaa

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