Momordica charantia (bitter melon): 111024482
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Entry
111024482 CDS
T05045
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111024482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111024482
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111024482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_23
AAA_29
ORC-CDC6-like
SMC_N
AAA
AAA_28
NACHT
AAA_15
AAA_5
AAA_22
AAA_33
AAA_18
AAA_30
Zeta_toxin
PduV-EutP
SRP54
AAA_24
AAA_25
AAA_14
AAA_16
Arf
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
111024482
NCBI-ProteinID:
XP_022157871
UniProt:
A0A6J1DZE9
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MAAKEDASSTGIRVQAMQFAYESDSPIFVEFNLEIGPGSRCLLVGANGSGKTTLLKILAG
KHMVGGRDVVRVLNSSAFHDTHLVCSGDLAYLGGSWSKTISSAGEVALQGDFSAEHMIFG
VEGTDPERRDRLIDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVV
ARMDLLDFLKEECDQRRATIVYATHIFDGLETWATHLAYIQDGELRKSEKLSEVEELKNS
ANLLSVVESWLRAETKSEKKKKNISPSVASPFMSSRHMAYYR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaggaagatgctagttccaccggcatcagggtacaagcgatgcaattcgct
tatgaaagtgattctcctattttcgttgaatttaatcttgagattggccctggatctcga
tgtcttctcgttggcgccaacggatctgggaaaacaactttgctgaaaattttggcaggc
aaacatatggttggaggaagagacgttgtccgggttctaaatagttcagcctttcatgac
actcaccttgtatgtagtggtgatttggcctacttgggagggtcttggagtaagaccatt
agctctgcaggagaggttgcattacagggagatttttctgctgaacatatgatattcgga
gtcgaaggaacggatcccgaaaggagagataggttgattgacctgcttgatatagatctc
cagtggcgaatgcataaggtatctgatgggcaacgtcgtcgggtgcaaatctgcatgggc
ctattacatcctttcaaggttcttttgctagatgaagtcacagtcgaccttgatgttgtt
gcaaggatggaccttctggactttctaaaggaagaatgtgatcagaggagagccacaatt
gtttatgcaacacacatatttgatgggctggagacatgggccactcatctggcatatatt
caagatggtgagcttagaaaatcagaaaagttatctgaagttgaagagttgaagaactca
gccaatctgctctcagtggttgagtcttggctgcgagctgaaaccaaatctgagaagaag
aagaagaacatctctccttccgttgcgtctcctttcatgtcttccagacatatggcttat
taccgttag
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