Methanoculleus chikugoensis: MchiMG62_11610
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Entry
MchiMG62_11610 CDS
T07488
Symbol
nth_1
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mchk
Methanoculleus chikugoensis
Pathway
mchk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mchk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MchiMG62_11610 (nth_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mchk03400
]
MchiMG62_11610 (nth_1)
Enzymes [BR:
mchk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MchiMG62_11610 (nth_1)
DNA repair and recombination proteins [BR:
mchk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MchiMG62_11610 (nth_1)
Prokaryotic type
MchiMG62_11610 (nth_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BBL67980
LinkDB
All DBs
Position
1158896..1159552
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AA seq
218 aa
AA seq
DB search
MNRTTACEVYRRLLLQYPVVDGRRHFLDFHNPYETLILTILSAQTTDRAVNAVRDALFSR
YPTPEALARAEPGEVEPIIRTIGFHRTKARHIVGAARKIVAEFGGEVPRTMEELRSLPGV
GRKTANIILSQAFDINVGIAVDTHVRRVSKRLGFTESTNPDIIERDLVALFPEEAWGDIN
YLLIRHGRAVCTAQNPKHAECVVADLCRYYRELGGGEE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcacgaccgcctgcgaggtctaccgccgtcttcttctacagtatcccgtcgtc
gacggcaggcgccattttctcgactttcataacccgtacgagacgctgatcctcacgatc
ctctcggcgcagacgaccgaccgcgccgtcaacgccgttcgggacgctctcttctcccgc
tacccgacgccggaggcgctcgcccgcgcggagcccggggaggtggagccgatcatcagg
acgatcgggtttcaccgcacgaaggcgcgccatatcgtcggggcggcgaggaagatcgtc
gccgagttcggcggcgaggtcccgcggacgatggaggagttgcggtccctccccggtgtc
gggaggaagaccgcgaacatcatcctctcccaggcgttcgacatcaacgtcggcatcgcg
gtcgacacccacgtccgccgggtctcgaagaggctggggttcaccgagagcacgaacccc
gacatcatcgagcgcgatctcgtggctctcttccccgaggaggcctggggggacatcaac
tatctcctgatccgccacggccgggccgtctgcacggcgcagaacccgaagcacgcggag
tgcgtcgtcgcggacctctgccggtattaccgggaactggggggcggggaggagtag
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