KEGG   Mastomys coucha (southern multimammate mouse): 116068700
Entry
116068700         CDS       T07224                                 
Symbol
Actb
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03082  ATP-dependent chromatin remodeling
mcoc04015  Rap1 signaling pathway
mcoc04145  Phagosome
mcoc04210  Apoptosis
mcoc04390  Hippo signaling pathway
mcoc04510  Focal adhesion
mcoc04520  Adherens junction
mcoc04530  Tight junction
mcoc04611  Platelet activation
mcoc04613  Neutrophil extracellular trap formation
mcoc04670  Leukocyte transendothelial migration
mcoc04714  Thermogenesis
mcoc04810  Regulation of actin cytoskeleton
mcoc04814  Motor proteins
mcoc04820  Cytoskeleton in muscle cells
mcoc04919  Thyroid hormone signaling pathway
mcoc04921  Oxytocin signaling pathway
mcoc04971  Gastric acid secretion
mcoc05014  Amyotrophic lateral sclerosis
mcoc05100  Bacterial invasion of epithelial cells
mcoc05132  Salmonella infection
mcoc05135  Yersinia infection
mcoc05164  Influenza A
mcoc05205  Proteoglycans in cancer
mcoc05225  Hepatocellular carcinoma
mcoc05410  Hypertrophic cardiomyopathy
mcoc05412  Arrhythmogenic right ventricular cardiomyopathy
mcoc05414  Dilated cardiomyopathy
mcoc05416  Viral myocarditis
mcoc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116068700 (Actb)
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    116068700 (Actb)
   04390 Hippo signaling pathway
    116068700 (Actb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116068700 (Actb)
  09143 Cell growth and death
   04210 Apoptosis
    116068700 (Actb)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116068700 (Actb)
   04520 Adherens junction
    116068700 (Actb)
   04530 Tight junction
    116068700 (Actb)
  09142 Cell motility
   04814 Motor proteins
    116068700 (Actb)
   04820 Cytoskeleton in muscle cells
    116068700 (Actb)
   04810 Regulation of actin cytoskeleton
    116068700 (Actb)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    116068700 (Actb)
   04613 Neutrophil extracellular trap formation
    116068700 (Actb)
   04670 Leukocyte transendothelial migration
    116068700 (Actb)
  09152 Endocrine system
   04921 Oxytocin signaling pathway
    116068700 (Actb)
   04919 Thyroid hormone signaling pathway
    116068700 (Actb)
  09154 Digestive system
   04971 Gastric acid secretion
    116068700 (Actb)
  09159 Environmental adaptation
   04714 Thermogenesis
    116068700 (Actb)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    116068700 (Actb)
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    116068700 (Actb)
  09172 Infectious disease: viral
   05164 Influenza A
    116068700 (Actb)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116068700 (Actb)
   05135 Yersinia infection
    116068700 (Actb)
   05100 Bacterial invasion of epithelial cells
    116068700 (Actb)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    116068700 (Actb)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    116068700 (Actb)
   05410 Hypertrophic cardiomyopathy
    116068700 (Actb)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    116068700 (Actb)
   05414 Dilated cardiomyopathy
    116068700 (Actb)
   05416 Viral myocarditis
    116068700 (Actb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcoc03021]
    116068700 (Actb)
   03019 Messenger RNA biogenesis [BR:mcoc03019]
    116068700 (Actb)
   03036 Chromosome and associated proteins [BR:mcoc03036]
    116068700 (Actb)
   03029 Mitochondrial biogenesis [BR:mcoc03029]
    116068700 (Actb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mcoc04812]
    116068700 (Actb)
   04147 Exosome [BR:mcoc04147]
    116068700 (Actb)
Transcription machinery [BR:mcoc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     116068700 (Actb)
Messenger RNA biogenesis [BR:mcoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     116068700 (Actb)
Chromosome and associated proteins [BR:mcoc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     116068700 (Actb)
    NuA4 complex
     116068700 (Actb)
  Chromatin remodeling factors
   BAF complex
    116068700 (Actb)
   PBAF complex
    116068700 (Actb)
   GBAF(ncBAF) complex
    116068700 (Actb)
   SWR1 complex
    116068700 (Actb)
Mitochondrial biogenesis [BR:mcoc03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    116068700 (Actb)
Cytoskeleton proteins [BR:mcoc04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     116068700 (Actb)
Exosome [BR:mcoc04147]
 Exosomal proteins
  Proteins found in most exosomes
   116068700 (Actb)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 116068700
NCBI-ProteinID: XP_031194459
LinkDB
Position
Unknown
AA seq 378 aa
MFAMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILR
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE
KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANT
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSXXXXXWI
SKQEYDESGPSIVHRKCF
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgttcgccatggatgatgatatcgctgcgctcgtcgtcgacaacggctccggcatgtgc
aaagccggtttcgcgggcgacgatgctccccgggccgtcttcccctccatcgtgggccgc
cctaggcaccagggtgtgatggtgggtatgggtcagaaggactcctacgtcggcgacgag
gcccagagcaagagaggtatcctgaccctgaaataccccattgaacacggcattgtcacc
aactgggacgatatggagaagatctggcaccacaccttctacaatgagctgcgtgtggcc
cctgaggagcaccctgtgctgctcaccgaggcccccctgaaccctaaggccaaccgtgaa
aagatgacccagatcatgtttgagaccttcaacaccccagccatgtacgtagccatccag
gctgtgctgtccctgtatgcctctggtcgtaccactggcattgtgatggactccggagac
ggggtcacccacactgtgcccatctatgagggctacgctctccctcatgccatcctgcgt
ctggacctggctggccgggacctgacagactacctcatgaagatcctgaccgagcgtggc
tacagcttcaccaccacagctgagagagaaatcgtgcgtgacatcaaagagaagctgtgc
tatgttgccctagacttcgagcaggagatggccactgctgcatcctcttcctccctggag
aagagctatgagctgcctgacggccaggtcatcactattggcaatgagcggttccggtgc
cccgaggctcttttccagccttccttcttgggtatggaatcctgtggcatccatgaaacc
acattcaattccatcatgaagtgtgatgttgacatccgtaaagacctctatgccaacaca
gtgctgtctggtggcaccaccatgtacccaggcattgctgacaggatgcagaaggagatt
actgctctggctcctagcaccatgaagatcaagatcattgctcctcctgagcgcaagtac
tctgtgtggattggtggctccatcctggcctcactgtcnnnnnnnnnnnnnntgtggatc
agcaagcaggagtacgatgagtccggcccctccatcgtgcaccgcaaatgcttctag

DBGET integrated database retrieval system