Mastomys coucha (southern multimammate mouse): 116072011
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Entry
116072011 CDS
T07224
Symbol
Rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116072011 (Rnf123)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116072011 (Rnf123)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116072011 (Rnf123)
Multi subunit type E3
KPC complex
116072011 (Rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
116072011
NCBI-ProteinID:
XP_031199040
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MASKGAGMSFSRKSYRLTSDAEKSRVTGIVQEKLLSDYLYRVFSSPDPGPPAATSRKPLN
FLNLPEHVDQLLQVDSEDDESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSN
FGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRK
WNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLS
FKESVAFNFGSRPLRYPVAGFRPLQDPPRADLVRAQRLLGCFQAALSVELDPVEGRLVET
ESSEWQLQGQPTVLLTLAHIFHHFAPLLRKVYLVEAVLMSFLLGIVEKGTPEQAQSVVHQ
ILDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTMSILRHEKSRKF
LLSNVLFDMLRSVVFFYIKSPLRVEDAGLRELIPTTWWPNRSSREGRDGREAKEETTEER
QRRRAYERGCQRLKKRIEVVEELQVQILKLLLDNKDDNGGEASRYIFLTKFRKFLQENAS
GRGNTPVLCPPEYMVCFLHRLVSALRFYWDEYKASNPRASFSEEAYIPPQIFYNGKVDYF
DLQRLGGLLSHLRKTLKDDLASKANIVIDPLELQAATMDDLDEDEEPASTAAQRPMQALA
IGGALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRLLGTMEKVKVRSLNVEQRSREDI
EGSHWNEGLLLGRPPEEPEQPLTENSLLEVLDGTVMMYNLSVHQQLGKMVGVSDDVNEYA
MALRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYW
LLRVCLRTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRL
AAILAKHFADPRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRVAMVRNLLAPYEQ
RPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLLR
QGSDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVS
LLRVLEMTITLVPEIFLDWSRPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGL
ESVDHYPILVAVTGILVRLLVHGPTSETEQATSVLLADPCFQLRSICYLLGQPEPLAPGT
ALPAPDRKRFSLQSYTEYISTEELAQVEQMLAHLTAASAQAAAASLPTSEEDLCPICYAH
PISAVFQPCGHKSCKACINQHLMNNKDCFFCKATIVSVEDWDKAANTSATSSAA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaagggggctggcatgtctttctcccgaaagagctataggctgacctcagat
gctgagaagtccagggtcacaggcattgtgcaagagaaactgctgagcgactacctgtac
cgcgtcttttcctctcctgaccctgggccccctgcagccaccagcaggaaaccgctgaac
ttccttaatctgcccgagcatgtggaccagctgctacaggtggacagtgaagacgacgag
agccagggacaagtggaaggccgacttggcccatctactgtggtcctagatcacacaggt
ggcttcgaggggcttctccttgtggatgatgacctcctgggggtgattggacacagcaac
tttggcactatccgttctaccacatgtgtgtacaaagggaaatgggtctacgaggtgctc
atctcctcccaggggctcatgcagatcggctggtgcaccatcaactgccgctttaatcag
gaggaaggggttggagacacacataactcctacgcctacgatgggaaccgagtgcgcaag
tggaatgtgaccacaacgaattatggcaaggcgtgggcagcgggggacattgtgagctgc
ctgattgatctggatgatggcactctgtccttttgcctgaatggtgtgtccctgggcact
gcctttgagaacctttccaggggcctaggcatggcgtacttcccagccatcagcctgtcg
ttcaaggagtccgtggcattcaacttcggcagccgtcctttgcgctacccagttgcgggc
ttccggcccctgcaggaccctccgcgtgctgacctggtccgggcacagaggttgctgggc
tgcttccaggcagcactaagtgtggagctggaccctgtggaagggcgactggtggagacg
gagagctcagagtggcagctacaggggcagcccactgtcctcctcacgctggcccacatc
ttccatcacttcgcaccactactgcgcaaagtatacctagtggaggctgtgctaatgagc
ttcctgctgggcattgtggagaagggcacacctgagcaggcacagtctgtggttcaccag
atcttggacctcttgtggctcttcatggaggactatgaggtacaggattgcctgaagcag
ttgatgatgtctctgctacgtctctaccgattctcgcccattgttccagacctgggtcta
cagatccactacctgcgcctcactatgtccatcctgagacatgagaagtcccgcaagttc
ctgcttagcaatgtcctttttgacatgctccggtccgtggtcttcttttacattaagagt
cctctgcgagtggaggacgctggcctgagggaactcattcccaccacctggtggcccaat
cgctccagcagggagggcagagatggtcgggaggcaaaggaggagaccaccgaagagcgg
cagcggaggcgagcctatgagcgtggctgccagagactcaagaaacgcattgaagtggtg
gaagaactgcaggtccagatcctgaagctgctgttggacaataaagatgacaatgggggt
gaagcttctaggtacatctttctgacaaaattccgaaagtttctgcaggagaatgccagc
ggccgggggaacacgcctgtgctctgcccccctgagtacatggtctgcttcctgcaccgc
ctggtgtctgccttgcgcttctactgggatgagtacaaagcttccaacccccgtgcgtcc
ttcagtgaggaggcttatatcccaccccagatcttctataatggcaaggtggactacttc
gaccttcagcgccttgggggcctcctctcacaccttcgaaagacccttaaagatgacctt
gcttccaaagccaatatcgtgattgaccccctggagctccaggcagccaccatggatgac
ctggatgaggatgaagagccagcctccacagcggcccagcgtcccatgcaagccctggcc
ataggaggggcactgcctctgccccggccaggctggctcagttctccaacactgggtaga
gccaaccgcttcctcagcactgcagctgtgagcctcatgaccccacggaggcttctgggc
accatggagaaagtaaaagtccgctcgctgaatgtggaacagaggagtcgtgaggacatt
gagggcagccactggaatgagggcctgctgttggggagaccccctgaagagcctgagcag
ccgcttacggagaactcgctgttggaagtcctggatggcacggtcatgatgtataatctc
agtgttcaccagcagctgggcaagatggtgggtgtgtctgatgatgtcaacgagtatgcc
atggccctgagagacacggaggacaagctccgtcgatgccctaagaggaggaaggatatc
cttgcagagttgaccaagagccagaaggttttctcagaaaagctggaccatctgagccgc
aggcttgcctgggtccatgccactgtctactcacaggagaaaatgctggatatctactgg
ttactgcgtgtgtgcctacgaaccatcgagcatggagaccgcacggggtctctttttgcc
ttcatgcctgagttctacctaagtgtggctatcaacagctacagcgcccttaagaattac
tttggccctgtgcacagcatggaggagctcccaggctatgaagagaccctgacccgctta
gctgctatccttgccaaacactttgctgaccctcgaatagtaggcactgacattcgagac
tcactgatgcaggccctggccagctacgtgtgctacccacattccctgcgggctgtggaa
cggatccctgaggagcagcgtgtcgccatggtgaggaaccttttggcaccctatgagcaa
cggccctgggcccagactaactggatcctggtgcggctttggaggggctgtgggtttggg
taccgttatacacggctgccacatctgctgaaaaccaagccagaagatgccaatttgccc
agccttcaaaagccctgcccttcgaccttgctgcagcagcacatggcggacctgctacga
caaggttctgatgtggcaccaagcttcctcaacagcgtccttaaccagctcaactgggcc
ttctccgagttcatcggcatgatccaggagattcaacaggccgctgaacgcttggagcgg
aactttgtggacagccggcagctcaaagtctgtgccacctgctttgatctatcagtcagc
ttgttgcgtgtcttggaaatgaccatcacactggtacctgaaatattccttgactggtcc
cgccctacctctgagatgctgcttcggcgtctggcacagctgctgaaccaggtgctgaac
cgggtgacagccgagaggaacctgtttgaccgtgtagttaccctacggctacctgggttg
gagagtgtggatcactaccctatcctggtggcagtgactggcatcctggtacgcctcctg
gtgcacgggccaacctcagagacagagcaagccacctctgtgctcttggctgatccctgc
ttccagcttcgttccatatgctatctcctggggcagccagagcccctagcacctggcact
gccttgcctgcccctgaccggaaacgcttctctctacagagttatacggagtacatcagc
actgaggagctggcccaggtggagcagatgttggctcacctgaccgctgcatctgcccag
gcggcagcagcctccctgcccaccagtgaagaggacctctgcccaatctgctatgcccac
cccatctctgctgtgttccagccttgcggtcacaagtcctgcaaagcctgcatcaaccag
cacctgatgaacaacaaggactgcttcttctgcaaagccaccattgtatctgtagaggac
tgggacaaggcagccaacacaagtgccacgtcctcagctgcctag
DBGET
integrated database retrieval system
